Raphanus sativus (radish): 108819470
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Entry
108819470 CDS
T06014
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108819470
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108819470
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108819470
Protein phosphatases and associated proteins [BR:
rsz01009
]
HAD phosphatases
Fcp/Scp phosphatases
108819470
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108819470
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Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
108819470
NCBI-ProteinID:
XP_018448016
UniProt:
A0A6J0KKB5
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Position
2:32088132..32093379
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AA seq
847 aa
AA seq
DB search
MYNSNRVQVYHEDVRVGEMEIHLPPPREDDVMKERVMEQVKMGIRVGRFSQPSQRCTPLS
VLTTISSSGLCFTLEASASATPAHDPLTFFHSSCLRDNKTAVMSLGEEELHLVAMCSENI
NNYRPCFWAFTVPPGVYDSCLGMLNLRCLGIVFDLDETLVVANTLRTFDVKTEGLLRRIS
CEMDPRRRAVMVAEMKRYQDDKTLLKQYVESDQVVENGEVIKAQYEIVPALSDNHKPLVR
PLIRLQERNTVLTRINPMNRDTSVLVRLRSSWEELKSYLTAKEGRKRFEVYVCTMAEKDY
ALEMWRLLDPEGNLINANDLLSRIVCVKSGFKKSLFNVFLNATCHPKMAMVIDDRREVWD
ENDQPRVHVVRAFSPYHSPQAEAAATPVLCVAKNIACVVRGGFFKDFDDSLLPRIAEISY
ENDVEDIPSPPDVSHYLVSEDETTGLNGNKDPLSSDKMADARVGRRLKEEIGGSLAVFPG
VNIEPRIAALVQQPMVSASYVSAPVPVPVVIQEPQQSAIAFPSIPFQQPATVAKHLVPSE
PSLQNSPGSEEGEVPGSELDLYTRRRLLILQHGQDPRDAAPGEPSSPKRLPVQAPPPHVQ
PRSSWLPAEEEMDPEIENPVGLLHKIATKCGTKVDYKPGLVASTDMRFSIEAWFCGKKVG
VGIGKSRREALQKAAEFSIQNLADIYLSHVNGDAGPSHMGAGPLTNGNVVMGNANTFDNK
PFARDETAMPVTYTRLEGSIRHTGSIPTLRELCASEGWELSFQSQRPLQSDMVHKDEFHA
KVAINGTVLGQGVGSTWEEARIHAAERALGNVRPLLQRQQSSRSFGGMSNKRLKPNFQRS
MQRMPSS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtataacagtaacagagtacaagtgtaccatgaagatgtgagggttggggaaatggag
atacaccttcctcctccaagggaagacgacgtgatgaaggagagagtaatggagcaagtg
aagatgggtatcagagttggccgtttttctcaacctagccagaggtgtactcctctttca
gtacttactacgatttcatcttctggactctgtttcacactggaagcttctgcttcagct
actcctgctcatgaccctctcactttcttccactcctcatgtcttagggacaacaagact
gcagtaatgtcccttggtgaggaagagctccatctggttgccatgtgctcggagaatatc
aataactaccgtccttgtttctgggcatttactgttcctcctggagtttatgattcctgt
cttggcatgctcaatcttaggtgtctggggattgtctttgatcttgatgaaaccctcgta
gtggccaataccctgcgcacatttgacgttaaaactgaggggttgctgcggagaataagc
tgcgagatggaccctcgacgccgtgctgttatggtggctgagatgaagcgttatcaggat
gacaaaactctgttgaagcaatacgttgaaagtgaccaggttgttgaaaacggggaggtg
attaaggcacaatatgaaattgttcctgccttgtctgacaaccataagcctcttgttcgt
cctctgataaggttgcaagagaggaacactgtcctgactcgcattaatccaatgaatcgt
gatacaagtgttcttgtgaggttgaggtcttcatgggaggaacttaaaagctatttgaca
gcaaaagagggccgcaagcgttttgaagtatatgtttgcacaatggctgagaaagattac
gccttagagatgtggaggctccttgatccagaagggaatttgataaacgcaaatgacttg
ctctctcgcattgtttgtgtgaaatctggttttaagaagtcactgttcaatgtgtttctc
aatgcaacttgccatccgaagatggcaatggtaattgatgatcgacgggaagtttgggat
gagaacgatcagccgagggtgcatgtagttcgcgcattttctccctaccattctcctcaa
gctgaagcagctgcaacaccggtactgtgcgttgccaaaaatattgcttgcgttgtcaga
ggtggatttttcaaggatttcgatgatagtctgctaccaaggattgctgaaatatcttat
gagaatgatgttgaagatattccatcaccgcctgatgtaagccactacttggtgtctgag
gatgaaacaacgggtttaaatgggaacaaagatccactttctagtgacaagatggctgat
gctagagtaggaagaagactgaaggaggaaattggtggatctttagctgtctttccgggg
gtaaacatagagccaagaatagctgctctcgttcagcaaccaatggtttctgcttcttat
gtttccgcaccagtaccagtcccagtcgtgatacaagaaccgcaacaatcagctatcgcc
tttccaagtattccgtttcaacaaccggcaacagtagctaaacacttggttccttcagaa
ccaagcttgcaaaattctcccggtagtgaggaaggtgaggtacctggatcagagttagat
ctatataccaggaggaggctcctcatattgcaacatggacaagatcctagagatgctgct
ccaggtgaaccttcatctccaaagagactaccagttcaagctccacctccacatgtgcag
ccaagaagtagttggcttcctgctgaggaggagatggatccagaaatagagaatccagtt
ggattgctacataagattgctactaaatgtggaactaaggtggactacaaaccgggtttg
gttgctagtacagatatgcggttctctattgaggcatggttttgtggtaaaaaagttgga
gtggggattggcaaatcaagacgagaagccctgcagaaggctgctgaattttctatccag
aacttggctgatatatatctgtcccatgtaaatggtgacgcagggccaagtcacatgggt
gcaggcccccttactaatggcaatgtggtcatgggaaatgcaaacacgtttgataataag
ccatttgcccgagatgaaacagcgatgccggttacatatacaagattagaaggctctatt
aggcacacaggctccattcctacgcttagggaactgtgtgcatcggaaggttgggagctg
tcttttcaatctcagcgtccgcttcaatctgacatggtccacaaagatgagtttcatgct
aaggttgcaataaatggaactgtattagggcaaggagttggatcaacatgggaggaagct
agaattcatgctgctgagagagcactgggtaatgtgagaccattgcttcaacggcaacaa
tcttcaagatcgttcggcgggatgtcaaataagcgtctgaagccaaactttcaacgatcc
atgcaacggatgccatcttcatga
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