Raphanus sativus (radish): 108820008
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Entry
108820008 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 2
KO
K28005
poly [ADP-ribose] polymerase 2 [EC:
2.4.2.30
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108820008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108820008
03036 Chromosome and associated proteins [BR:
rsz03036
]
108820008
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108820008
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
108820008
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108820008
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108820008
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108820008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
SAP
SAP_new25
DUF1840
Enkurin
Motif
Other DBs
NCBI-GeneID:
108820008
NCBI-ProteinID:
XP_056849161
UniProt:
A0A9W3CC24
LinkDB
All DBs
Position
2:complement(12174360..12177833)
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AA seq
612 aa
AA seq
DB search
MANKLKVNELRAKLAERGLITTGLKPVLVERLEEAIAEDAKKQESKSRRKRNRDSTDGTD
GSNKLIALSEFREMNVKELREEASKRGLATKGTKKELLERLCNDEDDMNGFEEEKSTKKG
AAVLDQWIPDHVKSEYHVLQRGDDVYDAMLNQTNIRDNNNKFFVLQVLESDNKKTYMVYF
RWGRVGVKGQSKLDGPYDSCDIAIELFSNKFYDKTRNQWSDRQEFILHPKSYAWLEMDYG
KNQNDSVANDIPKSSSEVKPEESKLDPQVAKFISLICNVHMMAQNMMEIGYNAKELPLGK
LSKSIISKGYKVLQRISEMIERYDRARLEELSGEFYTVIPHDFGFNKMSQFVIDTPXKLK
QKIEMVEALGEIEWATKLLSIDQGLQDDPLYYQYQQLNCGLTPVGADSEEFSMVAKYMEN
THAKAHSGYTVEIAQLFRASRAVETDRFQQFSSSKNRMLLWHGSRLTNWVGILSQGPRIP
PPEAPVTGYRFGKGVYFADMFSKSANYCYANSGSTDGVLLLCKVALGDLNELIYLDYEAD
NLPPGKLSTKGVGKTAPNPSEAKTLEDGVVVPLGKPVDHSSTMGMLLHNEYIVYNTEQIK
MRYVIQVKFNYK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagctcaaagtcaacgaactccgtgcaaagctcgccgagcgtggacttatt
actaccggactcaaacccgttctggtggagaggcttgaagaggctatcgcagaagacgca
aagaagcaagaatcgaagagcaggaggaaaagaaacagagactctacagatggtacagat
ggttcgaacaagttgattgcactcagcgagtttcgtgagatgaatgtgaaggagttgcgt
gaggaagctagtaagagaggcttagctacaaagggtacaaagaaggaacttcttgagagg
ctctgcaatgatgaagatgacatgaatggatttgaagaagagaaatcaacaaagaaggga
gcagcggtattggatcagtggattcctgatcacgtaaagagcgagtaccatgttctacaa
aggggtgatgatgtttatgatgccatgttgaaccagacaaatatcagggataataataac
aagttctttgtcctacaagtgctagagtcagataataagaaaacatatatggtctacttc
agatggggaagagttggtgtaaaaggacagagtaaactagatgggccttatgactcatgt
gatattgcaatagaattatttagcaacaagttctatgacaagacaaggaatcaatggtct
gatagacaggagtttatccttcatcccaagtcctatgcatggcttgaaatggactatggc
aaaaaccaaaatgattcagttgcaaatgatattcccaaatcatcttctgaagttaaacct
gaggaatcaaaactagatccccaggttgccaagttcatctctcttatatgcaatgtacac
atgatggcacagaacatgatggagataggatacaacgctaaggaattgccacttgggaag
ctaagcaagtccataatatcaaagggttataaagttttgcagagaatatcggagatgatt
gagcggtatgatagagcaaggcttgaggaactgagtggagagttctatactgtgataccc
catgattttggtttcaataaaatgagtcagtttgttatagacactccttaaaagttgaaa
cagaaaatagaaatggttgaggcattaggtgaaatcgaatgggcgacaaaattgttgtcc
atcgaccagggattgcaggatgatcctttatattatcagtaccagcaacttaactgtgga
ttgacaccagtaggagctgattcagaagagttctctatggttgccaaatacatggagaac
actcatgcaaaagcgcattcaggatacacagttgagattgctcaactatttagagcttca
agagctgttgaaactgatagattccaacaattttcaagttcgaagaacaggatgctactc
tggcatgggtcacgcctcactaactgggtcggtattttatctcaaggtcctcggatacct
cctccggaagcgcctgtaactggttacaggttcggaaaaggggtttactttgccgatatg
ttctccaagagtgcaaactactgctatgctaacagtggttccactgacggcgttctactc
ctctgcaaggttgctttgggagacctaaatgaacttatatatctggattatgaggcggat
aatttgcccccgggaaagctaagcacaaaaggtgtggggaaaacagcaccaaacccttca
gaggctaagacactagaagacggtgttgttgtcccacttggcaaaccagtagatcattca
agcaccatggggatgttattgcacaacgaatatattgtctataatacggaacaaatcaag
atgcgatacgtgatccaagtcaaattcaactacaagtag
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