Raphanus sativus (radish): 108820643
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Entry
108820643 CDS
T06014
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108820643
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108820643
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
108820643
NCBI-ProteinID:
XP_018449137
UniProt:
A0A6J0KME4
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Position
8:26515417..26517902
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AA seq
601 aa
AA seq
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MDFPSSKRPATAPGAESVQFRLLCPASRTGAIIGKGGSVIRHLQSLTGSKIRVIDDIPVP
SEERVVLITAPNATKKDDSSDAENPSADQTKPETDKPDEEAPPPPPSSLALVRVLERIVF
GDEAANAEGGSSELEKGELEGLCRVLVRGNQVDYLMSQGGMMMQRIRDDSGASVRIASTD
QIPPCAFPGDVVIQINGKFSSVKKALLMITSSLQESGAPPTTWEECSFPQPDYHSMEYHQ
WDYPPNPMPEDVGPFNRPIVEEEVAFRLLCPADKVGCLIGKGGAVVRALQNETGASIKVS
DPTHETEERIVVISARENLERRHSLAQDAVMCVHNRIVEIGFEPSAAVVARLLVHSPFIG
RLLGKGGHVISEMRRATGASIRVFAKDQATKYESQHDEIVQIIGNVKTVQDALFQITSRL
REAMFPGRIPFPGMGGPPPPPFMGPYPEPPPPFGPRPYPASPDRYHSPGGPYHERHCHGP
GFDRPPSPMSWTPQPPIDGHPGGMVPDVNHGFALRNEPIGSENLPMTSANVEIVVPQAYI
GHVYGENCSNLNYIKQVTGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLLHAFILCGQ
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccttcctccaagcgtccggcgacagctccgggagcggagtcagtacagttc
cgcctcctatgccccgcctcacgcaccggcgcaataatcggaaaaggcggctccgtgatc
cgccacctccagtccctcaccggttccaaaatccgcgtcatcgacgacatccccgtccct
tccgaagagcgcgtcgtcttgatcaccgcaccgaacgcaacaaagaaggacgattcgtca
gacgcagaaaaccctagcgcggatcagacgaagccggagacagataaacccgacgaggaa
gctcctccgccgccgccgtcgtctttggctttggttagggttttggagaggatagtgttc
ggcgacgaggccgcgaacgcggagggagggagtagtgagttggagaaaggggagttggag
ggtttgtgtagggttctcgtgagaggcaatcaagttgattacttaatgagtcaaggaggg
atgatgatgcagaggataagggatgatagtggagctagtgtcaggatcgcatctactgat
cagatccctccttgtgctttccctggagacgttgtgattcagataaatggaaagttttcg
agtgtaaagaaggcgcttttgatgattactagctctcttcaagagagtggtgcacctcca
acaacatgggaggagtgttcgtttccgcagcctgattatcactctatggagtatcatcag
tgggattatcctcctaacccaatgcctgaagacgttggaccctttaacagacccattgtc
gaagaggaggttgcgttcaggctcttgtgtccggctgataaagttgggtgcttgataggg
aaaggtggagccgtggttcgcgctttgcagaacgagactggtgcgtctattaaggtgtcg
gatcctactcatgagacagaggagaggatcgttgtgatatctgcacgagagaacttggag
agacggcactctcttgctcaagatgctgtgatgtgtgtgcataacagaatcgttgagatt
ggatttgaacccagcgccgcagttgttgccaggcttcttgtgcattcaccgtttatagga
cgtttgttggggaaaggaggtcatgttataagtgaaatgaggagagcgactggtgctagc
atccgtgtctttgcaaaagatcaagctaccaagtatgaatctcaacatgatgagattgtg
cagatcattgggaatgtgaagactgttcaagatgctttgttccaaataacaagtaggctt
cgggaagcgatgtttcctggaaggattccttttccaggaatgggtggtcctccacctccg
ccgttcatgggtccgtatccagaaccgcctcctccttttggaccgaggccatatccagct
tctccagatcgttaccattctccaggaggaccataccatgagaggcattgtcatggtcct
ggatttgacaggccaccttccccaatgtcttggactccacagccacctatcgatggccat
cccggtggtatggttcctgatgtgaaccacgggtttgctttaagaaatgaacccattgga
agcgagaatctgccaatgacaagcgcaaatgtggagattgtggttcctcaagcatacata
ggccatgtctatggtgagaactgcagtaacctgaattacatcaagcaggtaacaggcgca
aacgtggttgtgcatgatccaaaggcagggacaacagagggactagtagtagtctcaggg
acatcagaccaagctcactttgctcaaagccttcttcatgctttcattctttgcggtcaa
agttga
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