Raphanus sativus (radish): 108820797
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Entry
108820797 CDS
T06014
Name
(RefSeq) asparagine--tRNA ligase, chloroplastic/mitochondrial
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108820797
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108820797
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108820797
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
108820797
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108820797
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108820797
Prokaryotic type
108820797
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108820797
NCBI-ProteinID:
XP_018449302
UniProt:
A0A6J0KMV2
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Position
8:13763519..13766663
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AA seq
562 aa
AA seq
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MAAAFLPATTLRLTPFSTLRFLSSFPLSNPLFRPLRRPLLEGFPTNARRRCFCTAVSQSP
GSGEGKKVDNSYHNRFGSKVGEFRKKLKIAEVKGGADQGLGRVGQSLSIMGWVRTLRSQS
SVTFIEINDGSCLSNLQCVMSPDAEGYDQVESGSVLTGASISVQGTIVASQGTKQKVELK
VDKIIVVGKCDSSYPIQKKRVSREFLRTKAHLRPRSNTFGAVARVRNTLAYATHKFFQES
GFVWVASPIITASDCEGAGEQFCVTTLIPSSHETTDTSIDAIPKTKGGLVDWSQDFFGKP
AFLTVSGQLNGETYATALSDIYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMAC
ATAYLQYVVKYVLDNCKEDMEFFDTWIEKGIIHRLSDVVEKEFLQLGYTDAIELLLKANK
KFEFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDMLV
PRIGELIGGSQREERLEVLEARLDALKLDKESYWWYLDLRRYGSVPHAGFGLGFERLVQF
ATGIDNIRDVIPFPRSPGSADF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgtttctgccggcgacgactctccgtctcactccattctctactctccga
ttcttatcctcattccctctttctaatcctctcttccgccctctacgccgcccgcttctc
gaaggttttccgacaaatgctcgccggagatgcttttgcaccgccgtctcccaatctccc
ggttccggcgagggaaagaaggtggataacagttaccacaatcgattcgggagtaaagtt
ggagagttcaggaaaaagttaaagatagctgaagtgaaaggaggagcagaccaagggctg
ggtcgggtcgggcagagtctcagcatcatgggttgggtccgtacacttcgttctcagagc
agtgtcacgttcatcgagataaatgatggttcatgcttatccaacttgcaatgtgtgatg
agtcctgacgctgaggggtatgatcaggtagagtctggttcggtgttgactggagcatct
atatcggtacaaggtactattgtggccagccaggggactaagcaaaaggtggagctaaag
gttgacaaaatcattgtggttggcaagtgtgactcttcctatccgattcagaagaagagg
gttagccgggaattcttgaggactaaggctcatctacgtccaagatccaatacttttgga
gcggtagcgagggttaggaatactctggcatatgctacgcacaagttttttcaagaaagt
ggatttgtctgggtggcaagcccaattatcacagcatcggattgtgaaggagctggagaa
cagttttgtgtcaccacactcattcctagctcccatgagaccactgatacttccattgat
gcgattcctaaaacaaagggagggttggtcgattggtctcaggacttctttgggaaacca
gcattcttgacagtctctggccaactcaatggagaaacttatgccaccgctctctcagat
atatacacgtttggtcctacatttcgagctgagaattccaacacttccaggcacttggct
gaattctggatgattgaaccagaacttgcttttgccgacctgaatgatgacatggcctgt
gccaccgcctacctccagtacgtcgtaaaatacgttcttgataactgcaaggaagacatg
gagttttttgatacatggattgagaaaggaatcattcatcgcttgagtgacgtagttgag
aaagagtttctacagctgggttacacagacgccattgaacttcttctcaaagcaaacaag
aaatttgaattcccggttaagtgggggctcgatttacagagcgagcatgaaaggtacata
acagaggaggcatttgggggtcgtcctgtgataataagagactatcccaaggagataaaa
gcgttttatatgcgtgagaatgatgatgggaagacagtggcagcaatggatatgctcgtg
cctcggataggtgaactgataggtggaagccaaagagaggaaagacttgaagtgttggaa
gcgagacttgatgctttgaaactcgacaaagagagctactggtggtaccttgacctccgt
cgctatggttcagttcctcacgcgggatttgggctagggtttgagagactggttcagttt
gccactggaattgataatatcagagacgttattcctttcccgcgctcacctggatctgct
gacttctga
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