Raphanus sativus (radish): 108820873
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Entry
108820873 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108820873
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108820873
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108820873
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
108820873
NCBI-ProteinID:
XP_056851743
UniProt:
A0A9W3CJG9
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All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MANYHRVSFWDKKAYCLILCFLCWLRFSELVKEMDRVITQGFVLIFLLQGVHSRTLRSES
NTAESGQKVTVNTAGEQVVVDNGIIQLTFSNPAGLVTAIKYKGFDNVLNERTKNRVYWDI
VWYEPGQVSQTDFLIGEKFKIISQTSEQVEISFSKTWDTSKRGSTIPLNVDKRYIIRRGV
SGVYMYGVVERLKSWPTVTMDQTRIVYKLNATKFDYMAVDDHRQNLMPLEADRNLTDGSA
APLEYKEAVRMVKPKNKLFKGQVDDKYLYSMESKDNRLHGWLASEQRVGFWIITASNEFR
TCGPVKQELTSHTGPTLLSMFTSTHYAGKEINTTYASGEPWKKMFGPVFVYLNSAPSPDL
MWTDAKRQLAAEVKSWPYEFVKSEDYPLRQQRGTVQGQLSVKDSFKSKSKLNEEIAFVGL
ALPGEVGSWQAETKGYQFWTQADKTGTFTIANVRPGTYNLFAWVAGHIGDYKYEREITIT
PGKEINVGPLVYEPPRSGPTLWEIGVPDRSAAEFNIPDPDPALITKLYANHPNAPEDRFR
QYGLWDRYSAVYPKEDVTFTVGVSDYKKDWFFAHLNRKTGGKKLQATTWKIVFNLKEVSQ
NGNYTLRMALAAANTADILVEVNKPPSTKPMFRTGMVGRDNAIARHGIHGLYRLFNIGVQ
TNLLKVGDNTIYLTQNRVTSIFAGVMYDYLRLEGPSGAKQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggctaactaccatagagtatcattttgggataagaaagcatattgtctgatcttgtgt
tttctttgttggctgaggttcagtgaattagtcaaggagatggatcgggtcataactcag
ggttttgttctgatattccttcttcaaggtgttcattcccgaacgttgcgaagcgaatca
aatactgcagaatcgggacaaaaggttacggttaacacagctggcgaacaagtggttgtt
gataatggtatcatccaactcaccttctcgaatccagccggcttagtaactgcaatcaag
tataagggctttgacaatgtgttgaacgaaagaactaagaatcgtgtgtattgggatata
gtatggtatgaaccaggacaagtatcgcaaacagattttttaataggagaaaagttcaag
ataataagccaaacaagtgagcaagtcgaaatttcattttcaaaaacatgggatacctct
aaacgcggctcgacaattccactaaacgtagataaaagatatattattcgacgcggtgta
agtggagtgtatatgtacggtgtggtagagaggttaaaaagttggccgacggtaacaatg
gaccaaaccagaatagtctacaagcttaacgctacaaagttcgattatatggctgtagac
gatcatcgacagaatctaatgcctttagaggcagatcgaaatcttaccgatggtagtgca
gctccattggaatacaaagaagcggttcggatggtaaaaccaaaaaataaattatttaaa
gggcaggttgacgataagtatctttactcgatggaaagcaaggacaacagactacatggt
tggctcgcttcagaacaacgtgtcggcttctggattattactgccagcaacgagttccgt
acttgtgggcccgtcaaacaagaactcacttctcatactggacccaccttactttctatg
tttacaagtacacactatgctggaaaagaaatcaacacaacttacgcaagcggtgagccg
tggaagaagatgtttggtcctgtctttgtttatctcaactctgccccctctcccgatctc
atgtggaccgatgctaaacgacagttggctgccgaggttaaaagctggccttatgagttc
gtgaagtcagaagattaccctcttcgccaacaaagaggaacagtccagggtcaactatct
gtcaaggacagtttcaaaagcaagtcgaagttaaacgaagaaattgcttttgtgggttta
gcattacctggtgaagttggttcatggcaagccgaaaccaagggatatcaattttggaca
caagcagacaaaacggggacgttcaccatagcgaatgtgagacctggcacttataacctc
ttcgcatgggttgccggacatattggcgactataaatacgagcgtgaaattacaattaca
ccaggtaaggaaataaacgtaggacccttagtgtatgagccgccaagaagtggtccaacg
ttgtgggagatcggtgtaccggatcggagcgccgcagaattcaatatcccggatccggac
ccagcccttataaccaaactatatgctaatcacccaaatgctcctgaagacagatttaga
caatatggtctatgggatcgttacagtgcagtgtatcctaaagaagatgttacttttact
gttggagtgagtgactataaaaaagattggttctttgcacatctcaacagaaaaactgga
ggaaagaaacttcaagcaacgacatggaaaattgtttttaacttaaaagaagtgtcccaa
aatggaaattatactcttcgaatggctttggctgcagccaacactgccgatatattagtt
gaggttaacaaaccacctagcaccaaacctatgttcaggactgggatggtaggtcgggat
aacgcgatcgctagacatggaattcacgggttatacagattgttcaatataggcgttcag
acgaatttgctcaaggttggtgacaatacgatttatctcactcaaaaccgggtcactagt
atttttgcaggtgttatgtatgattatcttcgattggaaggtccttcaggagccaaacaa
taa
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