KEGG   Raphanus sativus (radish): 108820927
Entry
108820927         CDS       T06014                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108820927
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108820927
   03041 Spliceosome [BR:rsz03041]
    108820927
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108820927
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108820927
Spliceosome [BR:rsz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108820927
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 108820927
NCBI-ProteinID: XP_018449459
UniProt: A0A6J0KQZ4
LinkDB
Position
8:25877110..25879563
AA seq 343 aa
MDMLKKRRLDVNGAVSTGLTPQDARKLMERFSTEQLLDILQDAVARHPDVLELVRSTADA
DTTQRKLFIRGLAAETTTEGLRSLFSTYGDLEEAIVILDKATAKSKGYGFATFKHVDGAL
LALKEPSKKIDGRVTVTQLAAFRNQGSVAAAHVSARKIYVANVPVDMPADRLLNVFLAYG
EIEEGPLGFDKVTGESRGFALFVYKSCEGAQAALADPTKVVDGTHLQCKLAIEGKKGKLL
GQDGGSGPGRGSMVCPPPPGPYVGYSPQPHHMNSTPWVANAGHYNGPYRMPPPSSMSGGD
FPVNGHYWHSSASSYPGQHQPVGSSPMPRVPLGGMYPNCPPNY
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggacatgttgaagaagcgaagactcgatgtgaacggcgccgtatcgactggattgacg
ccacaggacgcgaggaagctaatggagcgattctccaccgaacagcttctcgacatcttg
caagacgccgtcgcgcgtcaccccgacgttctcgaacttgtcagatcgaccgcagacgcc
gataccactcagaggaagctcttcatccgcggcctcgcggcggagacgacgaccgaaggt
ctccggtcgcttttctccacttacggagatctcgaagaagccatcgtgattctcgacaag
gcgactgcgaaatcgaaagggtacggtttcgcgacgttcaaacacgtggacggagctctt
ctcgctctgaaggaaccgtctaagaagatcgatgggcgcgtgacggtcacgcagctcgcg
gcgtttcggaatcaaggttcggttgctgctgctcatgtgtccgcgaggaagatctacgtg
gcgaatgtgccggttgatatgcctgcggataggttgttgaatgtgtttctcgcttacggg
gagattgaggaaggtcctttgggtttcgataaagttactggtgaatcaagaggctttgcg
ttgtttgtgtataagagttgtgaaggtgctcaagcggcacttgctgatcctacaaaggtg
gttgatggaacacatctgcagtgtaagttggctattgagggtaagaaagggaagctattg
ggccaggatggtggttctgggcctggacgtggtagtatggtgtgtcctcctcctcctgga
ccttatgttggttactcaccacagccgcatcacatgaactccacaccatgggttgctaat
gctggtcactacaatggtccatatagaatgccgccaccaagttccatgtctggtggtgat
tttcctgtgaatgggcactattggcattcatcagcttcatcatatcctggacagcatcag
cctgttggttcctccccaatgccaagagttcctcttggaggaatgtacccaaactgtcca
ccaaattactga

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