Raphanus sativus (radish): 108820953
Help
Entry
108820953 CDS
T06014
Name
(RefSeq) auxin response factor 5 isoform X1
KO
K14486
auxin response factor
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108820953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
108820953
NCBI-ProteinID:
XP_018449492
UniProt:
A0A6J0KPH4
LinkDB
All DBs
Position
8:3701281..3708635
Genome browser
AA seq
879 aa
AA seq
DB search
MSSLACVEDKMKTNGLVNGGGTTATSQSSLLEEMKLLKDQSGTRKPVINSMLWHACAGPL
VSLPQVGSLVYYFSQGHSEQVSVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDE
IYAQMSLQPVHSERDVLPVPDFGLLRGSKHPSEYFCKTLTASDTSTHGGFSVPRRAAEKL
FPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVL
FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFFNPRAC
PAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKW
RNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTSGLKRQFHPSYFAGETEWGSLIK
RPLTNGVVPYASFPNMASEQLMKMMMMRPHNNQNVVTSFMSEMQQNVLMGHGGCLLGDVN
MQQQPMVMNQVVQNNNPSVSNTSGQEQNLSQSIMNPPTNTESSSGRVNHGNKEQSKEQAR
VCNEEKVNELIQKPSGLSPLQAADPCPEQIYPPQQSDPVNGFSFLETEELTSQVSPFQSL
AGSYKQPLMLSSNESSPVVLPDSTNSPLFQDVWDNQLNGLKFDQFSPLMQQDLYGGCQNM
CMSNSTNSNILDTPPPLSNTVLDDFCAIKETEFNCLVGNNNNNNNNNNSFAQDVQSQITS
ASFAESQALSRQDNSGGTGGTSSSNVDFDDTSLLQQQNNSKGSWQKLATPRVRTYTKVQK
TGSVGRSIDVTSFRDYEELKSAIECMFGLEGLLTRPQSSGWKLVYVDYESDVLLVGDDPW
EEFVGCVRCIKILSPTEVQQMSEEGMKLLNSACINDLKT
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcattggcttgcgttgaggacaagatgaaaacaaatggtttggttaatggagga
ggaacaacagcaacttcacaatctagtctgcttgaagagatgaagctgttaaaagaccag
tcaggaacgagaaagccggtgataaactctatgctatggcacgcttgtgcaggccctctt
gtttctctccctcaagttggtagcttagtgtattacttctcacaaggtcatagtgaacag
gtttctgtttcaaccagaagatcagcaacaacccaagttcctaactatccaaatcttcca
tctcagttgatgtgccaagtccataatgtcacccttcatgcagacaaagacagcgacgaa
atctatgctcagatgagtctacaacctgttcactctgagagagatgtgttacctgtacca
gactttggactattaagaggaagcaagcacccatctgagtatttctgcaaaacgcttact
gcaagtgatacaagcacacatggaggtttctccgtcccacgtagagctgcagagaagcta
tttccaccgttggactacacagcacagccaccaacgcaggagcttgtagttcgagatctt
catgagaatacttggacgtttcgccatatctaccgaggacaaccaaagagacatctccta
acaacagggtggagtttgtttgtcggctcaaagagattgagagctggagattccgtcttg
ttcataagagatgagaagtcgcagctgatggttggtgtgaggcgagctaaccggcaacaa
acagcacttccttcatcagttctctcagcggacagcatgcacattggtgttcttgctgct
gcggctcacgcaactgcaaaccgcactcctttcttgattttctttaatccaagagcgtgt
ccagcagagtttgtgatccctctagctaagtaccgtaaggcaatatgtggatctcagctg
tcagttggtatgaggtttggaatgatgtttgaaactgaagattcagggaaacgcagatac
atgggaaccattgttggaatcagcgacttggatccattgagatggcctggctctaagtgg
cgtaaccttcaagttgaatgggatgagcctggatgtaatgataagcctactagggttagt
ccatgggatattgaaacacctgaaagtctcttcatctttccttcactcacctcaggactc
aaacgccagttccatccatcttactttgctggggaaaccgaatggggtagcttgatcaaa
cggcctcttacaaacggggttgtgccttatgcatcatttccaaacatggcttcagagcag
cttatgaaaatgatgatgatgagacctcacaacaaccaaaatgttgtaacgtctttcatg
tctgagatgcagcagaatgttttgatggggcatggaggttgtttactaggagatgtgaac
atgcagcagcaaccaatggtgatgaaccaggtggtgcaaaacaacaatccttctgtttcc
aatactagtggccaagaacagaacctgtcacagagtattatgaatcctcctacaaatact
gaaagcagctctgggagagtcaatcatggaaacaaggagcagtcaaaagaacaggctaga
gtgtgtaatgaggaaaaggttaatgagctgattcaaaaaccaagtggcttgtctccttta
caagctgctgatccatgtcctgaacagatatacccaccacaacagtctgatccagtaaat
ggattctctttcctggaaacggaagagctgacatcacaagtctctcccttccagtctctt
gccggatcttacaagcaaccactgatgctatcctccaacgagtcttcacccgttgtgcta
cctgattcaacaaactcaccgctgtttcaggatgtgtgggacaatcagctaaacggtctg
aagtttgaccagttcagtcccttgatgcagcaagacctttatggtggttgtcagaacatg
tgtatgagtaatagcacaaacagcaacattctagatactcctcctccactctccaacaca
gttcttgatgacttctgtgccatcaaagaaaccgagttcaattgtttggtcgggaacaac
aacaacaacaacaacaacaataacagttttgctcaagatgtgcagtcgcagatcacatct
gctagctttgcagaatcacaggccttgtctcgccaagataactctggaggaactggtggt
acatcttcaagcaatgttgattttgatgatactagtctgctgcagcagcagaataatagt
aaaggctcatggcagaaacttgcaacgccccgtgtccgaacttacactaaggtccaaaaa
accgggtcagttgggaggtcaattgatgtaacaagcttcagggactatgaagagctaaag
tctgcaattgagtgcatgtttggacttgaaggactgctcactcgcccgcaaagctcggga
tggaagcttgtatatgttgattatgagagtgatgttcttcttgtaggagatgatccatgg
gaggagtttgtgggatgtgtaaggtgcataaagatactttcgccaacagaggttcagcag
atgagtgaagaaggaatgaagcttctgaacagcgcatgcattaacgatctcaagacttaa
DBGET
integrated database retrieval system
