KEGG   Raphanus sativus (radish): 108820961
Entry
108820961         CDS       T06014                                 
Name
(RefSeq) protein transport protein SEC31 homolog A
  KO
K14005  protein transport protein SEC31
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108820961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108820961
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rsz02044]
    108820961
Membrane trafficking [BR:rsz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108820961
Secretion system [BR:rsz02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   108820961
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40 WDR55 Beta-prop_EML_2 TPR_Sec16 Beta-prop_EIPR1 TPR_GEMI5 Beta-prop_HPS5 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_EML EIF3I Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_2nd SRA1 TcaA_2nd
Other DBs
NCBI-GeneID: 108820961
NCBI-ProteinID: XP_018449509
UniProt: A0A6J0KR47
LinkDB
Position
8:3410282..3418101
AA seq 955 aa
MSCIKRVDRSAYVAMAPEAPFMAAGTMAGAVDLSFSSSSKLEIFELDFNSGDHEMKLLGQ
CSSSERFTRLRWGSYGSGSEESPYGLIAGGLVDGSIGLWNPVSLIRSESNDSADVRHLSK
HKGPVRALEFNVISPNQLASGDDDGTICIWDLANPSEPSHVLKGSGSYTQGEISSVSWNR
EFKHVLASTSYNGTTVIWDVNNKKAITGFKNSESSDRFKGLISCSVLQWDPDNCNQIMIA
SDEDSSPTVKLLDIRYPQSPVSTFVGHHRGVIAMEWCPSDSLYLLTCAKDNRTICWNTKT
GQIVAELPTINNSNFDVHWSPKIPGVVSASSADGKISIYNLEGCSRNGSGENNLLDAAPL
TAPKWWKRPVSASFGFGGKLVSSNSKLPEASVVFLHSLATEQSLVNQITKFEAALENGEK
TSLRSLCRKKSEETVSEEEKETWSLLKIMLEEDGNAKTKLRTHLGFSLPSEDQKDQDVNE
PHATYSSENVEETQQESSDLSFDDAIQRSLVVGDYKEAVAHCLSANKMADALVIAHVGGT
TLWESTLDKYLKMSNAPYMKVVSAMVNNDLMSLVHTRPAKFWKETLALICTFAEGDEWTS
LCDALASHLLSSGFTLAATLCYICAGNVDKTVDIWSRSLEKDNARESYSERVQDLMEKTI
VLALATKNKRFNASLHKLFESYAEILASQGLVATAIKFLELLEPGDFSPELSVLREQISQ
SVYQEPTQAQTNVLTSPYNQAQPLLQPSFTTAPVANAQPSRTTLISLNPLPPQQRTLDSH
SPTPLAYSTYNPPPGPGSHQPNGLYLISKIHQTVVPQVELMVPTQRVVVQPPPAPVAPPP
TILTVDTSNVPVHHKPIVATLTRLFKETSDTLGLAKKRDIEGISRKVGALFSKLNREDIS
KQAAEKLSLLCQALDKHDFGAALQIQARMASTDWDECNFWLLPIKQMIKGRQNAR
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgtcttgcataaaaagagttgatagatccgcttacgttgccatggcaccagaagccccg
ttcatggctgccggaacgatggccggagccgttgatctgtctttcagctcatcctccaaa
ctagagatctttgaactagattttaactccggagaccatgagatgaaactattaggtcag
tgctcaagctccgagagatttactcgactcagatggggaagttatggatccggatccgag
gaatctccctatggtctcatcgccggtggcctcgtcgacgggagtatcggtttatggaat
ccagtttctctgattcgttccgagtctaatgatagtgcggacgttagacatctttcaaag
cataaaggacctgttcgtgctcttgagtttaatgttatctccccaaaccaacttgcatcc
ggggatgatgatggcacgatttgcatttgggatttagcaaatccttcagagccttctcat
gtcttaaagggtagtggctcttatacgcaaggtgaaatctcctctgtttcatggaataga
gagtttaaacatgttttagcatcgacctcatacaatgggactactgtgatatgggacgtg
aataacaagaaggctataacaggattcaaaaattctgaatcaagcgacagatttaaaggt
ctcattagctgctcagttttgcaatgggaccctgataattgtaatcagataatgattgca
tcagatgaagacagttcacctactgtgaagcttttggacataaggtatccacagtcacct
gttagcacatttgttggccaccacagaggtgtgattgcaatggagtggtgtccaagtgac
agcttgtatctacttacctgcgctaaagacaaccgaactatttgctggaacacaaagaca
ggacagattgtggctgagttacctactataaacaattcgaattttgatgttcattggtct
ccaaagataccaggagttgtatcagcatcttcagctgatgggaaaatcagcatctataac
cttgagggttgcagccggaatggtagtggagagaacaatcttcttgatgcagctccttta
acagcaccaaaatggtggaagcgcccggttagtgcatcttttggatttggaggaaagctt
gtgtcatctaactcaaagctccctgaggcctctgtggtgttcttgcatagccttgccaca
gaacaaagtctagtgaatcaaataactaaatttgaagctgcactagaaaatggagagaag
acttcactaaggagtttgtgcaggaagaaatctgaagagacggtatccgaggaggagaaa
gaaacatggagcttgctgaaaatcatgcttgaagaggatgggaacgcaaagacaaagttg
cgtacccatcttggctttagtttaccttctgaggatcaaaaagatcaagatgttaatgag
cctcatgctacatattcttctgaaaacgttgaagagactcaacaagaaagctctgatcta
tcatttgatgatgccatccaacgttcattggttgtgggagattacaaggaagcagtagct
cattgtttatctgcaaacaagatggctgatgctttagttattgctcacgtcggtggtaca
actttgtgggagagtactcttgataaatatcttaagatgagcaatgcaccttacatgaag
gttgtttctgcaatggtgaacaatgatttaatgagccttgttcatacaaggccagctaaa
ttctggaaagaaactcttgctctcatttgcacttttgcagaaggagatgaatggacaagc
ctctgtgatgctcttgcctcacatttgttgtcttctggttttactttggctgcaactctg
tgctacatttgcgcaggcaatgtcgacaaaacagtagacatctggtcgaggagccttgaa
aaagacaatgctagagaatcttattctgagcgtgttcaagatcttatggagaagactatt
gtccttgctttggcaaccaagaacaagagattcaatgcctctttacacaaactctttgag
agttatgctgagatactggccagccaaggacttgttgcaacggctataaagttcttagaa
cttcttgagcctggtgatttctctcctgaactttcagtattgagggaacagatttctcaa
agtgtttatcaggagccaactcaggcgcagacaaacgttcttaccagtccatataaccaa
gctcagccacttctccagccatcttttactacagctccagtagccaatgctcagccatca
agaactactttaatttctctaaatcctcttcctcctcaacagagaacattggattctcat
tcacctactccattggcatactcaacatacaatccaccacctggtcctggctcacatcaa
cccaatggtctatatcttatctctaagattcatcaaactgttgttccacaagtggaactc
atggttccaacacagcgggtagttgtgcaaccaccccctgcacctgtagctccaccacca
actattctgacagtggatacttccaatgtaccagtccaccataaacctatcgtggctaca
ttgacaaggctttttaaagagacatccgacacattaggtcttgccaagaagcgtgacata
gaaggtatctcaagaaaagtaggagctctattttcgaaactcaatagggaggacatctca
aagcaggctgcagaaaaactctctctgctatgtcaagctctggacaaacatgactttggt
gcagctttacaaatacaggcgcgtatggcgtccaccgattgggatgaatgcaacttctgg
ctcctaccaattaaacaaatgataaaaggaaggcaaaatgctcgataa

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