KEGG   Raphanus sativus (radish): 108821008
Entry
108821008         CDS       T06014                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03020  RNA polymerase
rsz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108821008
  09124 Replication and repair
   03420 Nucleotide excision repair
    108821008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsz03021]
    108821008
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108821008
Transcription machinery [BR:rsz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108821008
  RNA polymerase III system
   RNA polymerase III
     108821008
  RNA polymerase I system
   RNA polymerase I
     108821008
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108821008
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_Ribbon_YjdM DUF5816 HypA DUF1451 Zn_ribbon_13 At4g08330 Zn_ribbon_10 CoiA_N DmmA-like_C FtrD-like Cas12f1-like_TNB DUF5817 A2L_zn_ribbon Zn_ribbon_8 Prok-RING_1 DUF7129
Other DBs
NCBI-GeneID: 108821008
NCBI-ProteinID: XP_018449556
UniProt: A0A6J0NB97
LinkDB
Position
8:25692909..25693855
AA seq 51 aa
MDQQPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggatcaacagcccgaaccagtcacttacgtctgcggagattgtggacaagagaacact
ttgaagtcaggggatgtgattcagtgcagagagtgtggctatcgtattctctacaagaag
cgtacccgtagagttgttcagtatgaagctcgctga

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