Raphanus sativus (radish): 108821136
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Entry
108821136 CDS
T06014
Name
(RefSeq) transcription factor SPATULA-like
KO
K28361
transcription factor SPT/ALC
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108821136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108821136
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108821136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Ribosomal_S20p
bHLH_LHW
CENPU
Motif
Other DBs
NCBI-GeneID:
108821136
NCBI-ProteinID:
XP_018449689
UniProt:
A0A6J0KRL4
A0A9W3CCL1
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
KLISSPSSSTASIYDTRSNNSNHHPPSSSDEISLFLRHMIDRSSPLPSYYSPATMTTAVH
GEPHAGNSICFVSPQTSKRSAGFSEVLVGSGVGSSSAAACYGFSGGGGGNNMDQGNSSGT
RVSSSSVGASGNETDEYDCESEEGVEAVVDDELPIKSGPSRSSSKRCRAAEVHNLSEKRR
RSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHPLCLPGT
ALHPLQLSQLRPGVPPEATNDSLLNAPAMINTGASSYALEPSIRSHFAPFPLLTPPVEMS
CEGELTHPRLNIGHSNTNLNGGQAPFNGQQPDIKDRLT
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
aaattgatttcatctccttcttcttcaactgcatcgatttacgacactcgtagtaataat
agtaatcatcatccaccgtcttcttccgacgagatttctctgtttctccggcatatgatc
gaccgttcttctcctttaccttcttactattctccggcgacgatgactacggcggttcac
ggagaaccacatgcaggcaactcgatatgtttcgtttctcctcagacgtcgaagcgctca
gctggtttctctgaggttttagtcggctccggcgttggatcaagctcagccgccgcgtgt
tatggtttctccggaggtggtggtggtaataacatggatcaaggaaacagctcagggact
cgtgtttcgtcttcttcggttggagctagcgggaatgagaccgacgagtatgactgcgaa
agcgaggaaggagtagaagctgtggttgatgatgaacttcccattaagtctggtccttcg
cgaagctcatcaaagagatgcagagctgctgaagttcataatttgtcggaaaagagaaga
agaagtagaatcaatgaaaaaatgaaagctttacaaagtctcatccctaattcaaataag
acggataaggcttcaatgcttgatgaagccatagagtatctgaaacagcttcagctccaa
gttcagatgttgacaatgaggaatgggataaacttacatcctctgtgcttacctggaact
gcactacacccattgcaactctctcagctccgacctggtgttcctccagaagcaaccaat
gattctctacttaatgcaccagcaatgatcaacactggggcttcttcatacgcgttggaa
ccttccattcgcagtcactttgcacctttccctctccttactccacctgtggagatgagt
tgtgaaggagagttaactcatccaaggttgaacattggtcattccaacacaaacttaaac
gggggacaagctccgtttaatgggcaacaacctgacattaaagatcgacttacttga
DBGET
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