Raphanus sativus (radish): 108821290
Help
Entry
108821290 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108821290
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108821290
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108821290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
108821290
NCBI-ProteinID:
XP_056851745
UniProt:
A0A9W3CJU4
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MRNGVPLKKMARFMTQVFVLISFLQGVYSQTSGNKSNIGKPGQNLASPPVTLKKIGLNQV
VIDNGIIQVTFSNPSGLITGIKYNGINNVLNGKIKNRGYWDVVWYEPEKESQTDFLKGEK
FDIINQTTEHVEISFSRTWTITRRGSIAPLNVDKRYIIRSGVSGVHMYAVLERLEGWPEV
EMDQTRIVFKLDTTRFDFMAISDNRQKTMPSNADRDINDGVAARLAYKEAVRLKNPQNHM
LKGQVDDKYMYSMEDKDNKVHGWISSKQRVGFWMITPSDEFRTCGPIKQDLTSHVGPTVL
SMFTSIHYVGKEINTAYASDEPWKKMFGPVFVYLNSGSSSDLLWTDAKRQMAEEVQSWPY
DFVKSVDYPLRQQRGTVKGQLFVMDSYKSKSKLNGEFAFVGLALPGQAGSWQTENKGYQF
WTRADKMGRFAIANVRPGSYSLYAWVVGFIGDYKYECDIIITPGKEINVGPIVYEPPRNG
PTLWEIGVPDRTAAEFNIPDPDPTLFTKLYLNNANPSQDRFRQYGLWNRYSVLYPRKDLV
FTTGVSDYKKDWFYAHVNRYSGKEKYQATTWKIVFNLKTVIKTGNYTLRIALASATKADL
FVRVNKANSHPIFKTGLIGQDNAIARHGIHGLYRLYSIDVQRKLLRVGDNTVFLTQNRNT
SFFTGVMYDYLRLEGPY
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacggagttccgttaaagaagatggctcggttcatgactcaagtttttgttctg
atatcttttcttcaaggtgtttactcccaaacgtcaggaaacaaatctaatatcggtaaa
ccgggacaaaacctcgcatctcccccggttacgcttaagaaaattggccttaaccaagtt
gtcattgataatggtatcatccaagtcaccttctcgaatccatcaggcttaataaccgga
atcaaatataatggtattaacaatgtgttgaacggcaaaatcaagaatcgcgggtattgg
gatgtagtatggtatgaacccgaaaaagaatcgcaaacagattttttaaaaggagaaaaa
tttgatattataaatcaaacaactgagcatgtcgaaatttcattttcaagaacatggact
atcactcgacgtggttcgatagccccattaaacgttgataaaaggtatattattcggagt
ggtgtatccggagtacatatgtatgctgtgttagagaggttagaaggttggccggaagtg
gagatggaccaaaccagaatcgtctttaagcttgacacaacaagattcgattttatggca
atatcagataatcggcagaaaactatgccttctaatgcagatcgagatatcaacgatggc
gttgccgccagattggcttacaaagaagcggttcggttgaagaatccacaaaatcatatg
cttaaaggacaggttgacgataagtatatgtactcgatggaagacaaggacaacaaagta
catggttggatctcttctaaacaacgtgtgggcttctggatgattactcccagtgatgag
ttccgtacatgtgggcccatcaaacaagatctcacttctcatgttggacccaccgtactt
tctatgtttacaagtatacattacgtgggaaaagaaattaatacagcttatgcaagcgat
gagccgtggaagaaaatgtttggtcctgtctttgtctatctcaactctggctcctctagt
gatctcctttggaccgatgctaaacgacagatggctgaggaggttcaaagctggccttat
gacttcgtgaagtcagtagactaccctcttcgccaacaaagaggaacagtcaagggtcaa
ctatttgtcatggacagttacaaaagcaagtcgaagttaaacggggaatttgcttttgtg
ggtttagcattacctggtcaagctggttcatggcaaaccgaaaacaagggatatcaattt
tggacacgagcagacaaaatggggaggttcgctatagcgaatgtgagaccaggaagttat
agcctctacgcatgggtcgtcggatttatcggagactataaatacgagtgcgacattatc
atcacaccaggcaaagagataaacgtaggacccatcgtgtacgagccgccaagaaatggt
ccgacgctgtgggaaatcggggtaccggatcggactgcagcagaattcaatatcccagat
ccggatccaacccttttcaccaaactttatcttaataacgcaaatccttctcaagacaga
tttagacaatatggtctatggaatcgttacagtgttttgtatcctcgaaaagatcttgtt
tttactactggagtaagtgactataaaaaagattggttctatgcacatgtcaacagatat
tctggaaaagaaaaatatcaagcaacgacatggaaaattgtgtttaatttaaaaacagtg
attaaaacaggaaattacacacttcgaatagctctggcttcagccacaaaagcggatttg
tttgttcgggttaataaagccaattcccatcctattttcaagaccgggttaataggtcag
gacaacgcgatcgctaggcatggaattcatggtctgtacagattatacagtatcgatgtt
caaagaaagttgcttagggttggcgataatacagtttttcttactcaaaatcggaatact
agtttttttacaggtgttatgtatgattatcttcgtttggaaggtccatattaa
DBGET
integrated database retrieval system
