KEGG   Raphanus sativus (radish): 108821330
Entry
108821330         CDS       T06014                                 
Name
(RefSeq) SKP1-like protein 13
  KO
K03094  S-phase kinase-associated protein 1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03083  Polycomb repressive complex
rsz04120  Ubiquitin mediated proteolysis
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108821330
   04120 Ubiquitin mediated proteolysis
    108821330
  09126 Chromosome
   03083 Polycomb repressive complex
    108821330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108821330
   04121 Ubiquitin system [BR:rsz04121]
    108821330
   03036 Chromosome and associated proteins [BR:rsz03036]
    108821330
Membrane trafficking [BR:rsz04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    108821330
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     108821330
   Cul7 complex
     108821330
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     108821330
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     108821330
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 108821330
NCBI-ProteinID: XP_018449875
UniProt: A0A6J0KPQ2
LinkDB
Position
8:complement(23833139..23833618)
AA seq 159 aa
MSTSKIITLKSCDDEIFEVEEAVAVQSKMIAHMVEDDCVDGEIPITNVTGTILTKVIEYC
KKHVVNPDVDGDSSSSTEDELKIWDAEFVKNMDHDMLFALIMAANYLNIKDLLDLTCQTI
ADMIKDFSVDEVRTFFSIENDYTPEEEAEVRAENEWAFE
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcgacgtcaaagattatcacgctgaagagctgcgatgacgagatctttgaggttgaa
gaagcggtagctgtacagtcaaaaatgatagctcacatggttgaagatgactgtgttgat
ggtgaaatacctattaccaatgtcactggcacgattctcaccaaagtaatcgaatattgc
aaaaaacatgttgtcaaccctgatgttgatggtgattcgtcttcttccacagaagatgaa
ctcaagatttgggatgctgagtttgtgaagaatatggatcatgatatgctttttgccttg
ataatggctgctaattatctaaacatcaaggatcttctcgatctcacttgccaaaccata
gctgatatgatcaaagatttttctgtagatgaggttcgaacatttttcagcatagaaaat
gattatacaccagaagaagaagcagaggttcgagcagaaaatgaatgggcttttgaataa

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