Raphanus sativus (radish): 108821339
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Entry
108821339 CDS
T06014
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108821339
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Other 90S particles
108821339
Pre-60S particles
Other pre-60S particles
108821339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_WDR75_2nd
NBCH_WD40
DsbA_N
DUF3391
MDM31_MDM32
Motif
Other DBs
NCBI-GeneID:
108821339
NCBI-ProteinID:
XP_018449884
UniProt:
A0A6J0KS61
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All DBs
Position
8:complement(13096076..13099700)
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AA seq
478 aa
AA seq
DB search
MITAFSWVPKGAAKAIPDHAELPTKEEIEKLKESCEQVYSEEEEDDTEDEEENSEVVHAK
TVAEALGRTSNSKNASSSMEVNDLNEDLMKELDMDNYDEEDDGIEIFSSGNGGLYYASNE
MDPYLHNHDDSDDSDEDEGQTILPTKSMIVCAKTDDKDASCLDVCVCEETSNGYPNIYSR
GDIYELPAVPLCTAWLDCPLKGGEKGNFLAVGLCKKPMIEIWDLDVKDEVLPCVQLGGKE
KGNYKEGSHTRSVLGLAWNKEFRNTLASSSADKKVKVWDMATETCKITMEHHTKEVQAVA
WNHYAPEVLLSGSFDQTVVLKDGRNPSHSGFKWSVMSKVENLAWDPHSEHFFVVSLENGT
VKGFDIRQASNSASDLKPSFTLQAHHKPATCVSYNTSAPNLLATGSMDKTVKLWDLSDNK
PSCIASHIPNAGSLFSIDFSPDNPFLLAIGGTRGELKVWDTLSDANVSPRYGSSRVRP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgataactgcattttcatgggtaccgaaaggggctgcaaaggccatacccgaccatgct
gaacttcctacgaaggaggaaatcgaaaagctcaaggagagttgtgaacaagtttacagt
gaggaagaagaagatgatactgaggatgaagaagagaatagtgaagtagttcacgcgaaa
acagtagcagaagctttgggaagaacttccaatagcaagaatgcttcttcttcaatggag
gttaatgacttgaatgaagatttgatgaaagaactcgacatggataattatgatgaagaa
gatgatggaattgaaatttttagctccgggaatggaggtctttattatgcgagtaatgag
atggatccatatctccataatcacgatgatagcgatgactcagatgaagatgagggccag
acaatcttaccaaccaagtcaatgattgtctgcgctaagactgacgacaaagatgctagc
tgtcttgacgtttgtgtatgtgaggaaacatcgaatggttatccaaatatttatagtcgt
ggtgatatatacgaattgccagcagttccattgtgtactgcttggcttgattgtccactt
aaaggaggagaaaaaggaaatttcttagctgttggtttgtgtaagaagccaatgatagag
atatgggatcttgacgttaaagacgaggtgttaccttgtgtacaactaggaggaaaagag
aaagggaactacaaagaaggtagccacactagatcggttcttggtcttgcttggaataag
gagtttcgaaacactcttgctagttctagtgctgacaaaaaggttaaagtttgggatatg
gctactgaaacatgtaagattactatggagcatcacacaaaggaggttcaagcggttgca
tggaatcattacgctccagaagtgcttcttagtgggtcgtttgatcaaactgttgtattg
aaagacggaagaaatccttcacactcgggtttcaaatggtcagtcatgtccaaagtagaa
aacttggcctgggatccacatagtgaacacttctttgtggtaagtcttgaaaacggaact
gtaaagggtttcgatatacgtcaagcctcaaattcagcctctgatttaaaaccaagtttc
actctccaagcacatcacaaaccagccacctgcgtctcgtacaacacttcagcgcctaat
cttttggcaaccggatctatggataaaacggtcaagctttgggatctctcagacaacaag
ccttcatgcattgcttctcacataccaaacgctggaagcttattttccattgatttctct
ccggataatcctttcttactcgctatcggtggcacaaggggggaactaaaagtttgggac
acactttctgacgcaaatgtctcccctagatacggaagcagccgagtccgaccataa
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