KEGG   Raphanus sativus (radish): 108821364
Entry
108821364         CDS       T06014                                 
Name
(RefSeq) histone deacetylase 7
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03082  ATP-dependent chromatin remodeling
rsz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108821364
   03083 Polycomb repressive complex
    108821364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    108821364
Enzymes [BR:rsz01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108821364
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108821364
   HDAC complexes
    Sin3A-HDAC complex
     108821364
    BRAF-HDAC complex
     108821364
    REST complex
     108821364
    SHIP complex
     108821364
    MiDAC complex
     108821364
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108821364
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108821364
  Chromatin remodeling factors
   NuRD complex
    108821364
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 108821364
NCBI-ProteinID: XP_018449906
UniProt: A0A6J0KQW8
LinkDB
Position
8:11765806..11767784
AA seq 412 aa
MENAASLASGPDGRKRRVSYIYEPGIGEGNQRVSQQISTTHNLIRSYQLHNDMDIIRPTL
AKDSDLIQFHSPEYISFLRSVTPEYIDDMQAYKSENVDDTSTLQLFNLDESDTPLFPGLI
DYCRLYAGGSISAASKLNGNEADIAINWSGGMHRAKRDEACDFGYVNDVVLGILELLNVF
KRVLYIDIGYFHGDAVQEAFDKTDRVMTISFHMHGAQRSGYITDYGVGKGEYYSLNAPLK
YGMDDKTLVNLLVPVVHKAMEVYQPEAIVLQCGPDSLADDVLGEFNLTAKGPGTCLSYIR
SFNVPLMLLGGPGHNLGNVARCWCYETAVAVGKEIDEDLDNTVSDACFHPDYQLRIEPGF
MENLNTREYIANIKRTLLNQLSQVIHAPSVQFQDTPPISQVTEEAEEDMETR
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggagaatgcggcgagcttggcttcaggtcccgacggaaggaaacggcgcgtgagctac
atttacgagccaggcatcggagaaggcaatcaacgggtatcccaacagatcagtacgact
cacaacctcatccgcagctatcaactccacaacgacatggatatcatccgccctaccctc
gccaaagattcagatctcattcagttccactcgccggagtacatatcattcctccgctca
gtcacgccggagtacatcgacgacatgcaggcttacaagtcagaaaacgtagacgatact
agtaccctccagctcttcaacttagacgagtcggacacccctctcttccctggcctcatc
gattattgccgtctctacgctggtggttctatctccgccgcctccaaacttaacggaaac
gaagctgatatcgccatcaactggtccggcgggatgcaccgtgccaagagagatgaggct
tgtgactttggctacgtcaacgacgttgtgcttgggatcctcgagttgctcaatgtcttc
aagcgagttctctacatagatattgggtacttccatggagatgcggtacaagaagcattc
gacaaaactgatagggttatgactatttctttccacatgcatggtgcccaaagaagtgga
tacataacagactacggggtaggaaagggagaatactattctctaaatgcaccactgaag
tatggtatggacgataagactttggtcaatttattggtacctgttgtccacaaggctatg
gaggtttatcagcctgaagcaattgttcttcagtgtggccctgattcgctagctgatgat
gtcttgggtgaattcaacttgactgccaagggtcccggtacttgtctctcgtacatacga
tcattcaatgttcctctcatgctcttgggtggtccaggtcacaatctcggaaatgttgcc
cgttgctggtgctatgagactgctgttgcggttggaaaagaaattgacgaagatctcgat
aacactgtgtccgatgcgtgctttcacccagattatcagcttcgtatcgagccgggcttc
atggagaatttaaacacacgcgaatatattgcaaacataaagaggacactactaaatcaa
ctttctcaagtgatacacgcacctagtgtgcagtttcaagacactccaccaatcagtcaa
gttacagaagaagctgaagaggacatggagacgagataa

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