Raphanus sativus (radish): 108821438
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Entry
108821438 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108821438
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108821438
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108821438
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108821438
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108821438
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108821438
NCBI-ProteinID:
XP_018449982
UniProt:
A0A6J0KPU9
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All DBs
Position
8:complement(13434977..13437703)
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AA seq
638 aa
AA seq
DB search
MLVANSEFSSSILPRSPLIPNPVETLDESIGNNQASLSTEEVSLPPRNSDEPPSAPLNET
LIVSSPLRLEHGECSDSQVVTKPINHSKSNNTNLVICLSDSTTNRQQRSPNVSPGSDTDV
DSENKPLRRRFRQEPPKIVESTRVGAGLLNLGNSCFINSVLQCFTHTVPLIESLYSYQYQ
DPCTCNERFCVIGALRYHIGYALATTSLFSISPIYFFDNLNYFSPDFRCYQQEDAHEFLH
AFLNKLEICCLNRRNDVNFVQHIFGGRLVSELRCCNCNYVSETFEDSLGLSLEIEDFDNL
QSALDSFTRVEKLEEQMTCDNCDEKVSKEKQLLLHNLPQVITFHLKRFKNNGYFMMKNYN
FVEFPLELDLLPYMSNGQVATKYYLYALVKHYGSLAYGHYSSFVRSAPKIWHKFNDKQVT
RVDEDFVLQQNSYILFYARDGTQWFSTAIEELHPMTDEDSSSEYSSQTSDSDHTNEECSS
EISSENVSKKGCGSAGLSDLLNAATEESFVSDSDKPKEDVLSEPEEFSDEDSYSMELLVD
SDDDSNNSCTEKEADSSLDIEKATSSVGFSPDSSSKQPEGSFRIQLGQVETTKNQEEEES
CKEPLLIRSLMKKPPPRDRELDEPMSTSGSAQKKIKTS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgctggttgctaattcggagttctcttcatctattttacctcgttcgccgttaatacca
aaccccgtcgaaaccctagacgagtcgattggtaataatcaggcctcgctctcgacggag
gaggtctcacttccgcctcgtaactcagacgagcctccttccgctccgttgaacgaaacc
ctaatcgtgtcttctccgttacgtcttgagcacggcgagtgcagtgattctcaagtcgtc
accaagcctataaatcactctaagagcaacaatacaaacttggtcatttgtttgtctgat
tccacgactaatcgccaacaacggtctcccaatgtttcacctggatccgatactgatgtt
gactcagagaacaaacccttgcggaggagattcagacaagaacctccaaagatcgtggaa
tccactcgtgttggtgctggacttttgaacctaggcaacagctgtttcattaactcggtc
ttgcaatgtttcactcacacagtgcctcttatcgaaagtctctactcataccaatatcaa
gatccttgtacctgcaacgagaggttctgtgtgataggggctcttcgatatcatatcggt
tatgcactggcgaccacttcattattttcaatatctccgatctatttctttgacaatctc
aattatttttcacctgacttccggtgttaccaacaagaagacgcacatgagtttctacat
gcgtttttaaataagttggagatatgttgtttgaatcgacgaaatgatgttaactttgtt
caacatatatttggtggtcgtctcgtcagtgagcttcgttgctgcaactgcaactatgtt
tccgagacatttgaagattctcttgggttgagtttggaaattgaagactttgataacctt
caaagtgcactagattcctttactcgtgtggaaaaacttgaagagcaaatgacgtgtgat
aactgtgatgaaaaagtttcaaaggagaagcaactcttgctacataatctgccacaggtt
atcacattccacttgaagagattcaagaataatggatatttcatgatgaagaactacaac
tttgtcgagtttccattggagttagacttgctaccatatatgagcaatggccaagttgct
acaaaatattatctttatgctcttgtgaagcattatgggtcattagcttatggtcattac
tcttcctttgtgaggtcagccccaaagatatggcataagtttaatgacaagcaggtcact
agagtcgatgaagattttgtgttacaacagaattcatatattcttttctatgcaagagac
gggactcaatggttttcaacagccattgaagaattgcatccaatgaccgacgaagatagt
agctcagaatattcttcgcaaacgtctgactctgatcataccaacgaggagtgttcatct
gaaatcagttctgagaatgtatccaaaaagggatgtggctcagcgggattatctgaccta
ttaaatgccgcgacagaagagagttttgtttccgactccgacaaacccaaggaagatgtg
ttgtctgaaccggaagagtttagtgatgaggattcttattccatggaattgcttgtggat
tctgatgatgattctaacaactcatgcaccgagaaagaagcagattcttctttagacatt
gaaaaagctacatctagtgttggtttttctcctgactcgtcgtcaaaacagccggaagga
agtttccgaattcaactcggacaagtggaaactacaaagaaccaagaagaagaagaatct
tgcaaggaaccattactaataagaagcctcatgaagaaacctccacctcgtgatagagag
ttggacgaacctatgtctacatctggttctgcacaaaaaaaaataaaaacatcatga
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