KEGG   Raphanus sativus (radish): 108821466
Entry
108821466         CDS       T06014                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized WD repeat-containing protein C17D11.16-like
  KO
K14791  periodic tryptophan protein 1
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rsz03009]
    108821466
Ribosome biogenesis [BR:rsz03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    108821466
  Pre-60S particles
   Other pre-60S particles
    108821466
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_RIG_2nd WD40_RFWD3 WD40_Gbeta Beta-prop_EIPR1 WDR55 Beta-prop_Aladin WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_SCAP EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_DCAF12 NBCH_WD40 Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_IFT122_1st Tub_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 108821466
NCBI-ProteinID: XP_018450003
UniProt: A0A6J0KQX2
LinkDB
Position
8:complement(13083592..13086459)
AA seq 490 aa
MITALSWIPKGSLKPVPDAAEPPSKEEIKELIESGAFSASVDDDSNEEEEEEEISEVDHA
KAVAEAFGKSSSSSKKASSTMEVDDVATGMKELDMDNYDEEDDGIELFSSGRGDLYYPSN
ELDPYLKDATDDDDDEEDVDDTTIKPTDSVIICARNEDEVSHLEVYVYEESSDGSPNMYV
HHHIIIPEFPLCTAWMDCPLKGGEKGNFVAIGSKETPTIEIWDLDVRDEVLPCVQLGGVE
EMEIIKKKKSKKQKYKEGSHTDSVLGLAWNKEFRNILASGSADKKVKVWDVATGTCKITM
EHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHCE
HSFVVSLEDGTVKGFDIRAAQSGSDSDLKPSFTIQAHDQDKGVSSISYNVSAPNLLATGS
MDKTVKLWDLSNNEPSCIASHKPKAGAVFSISFSVDNPFLLAIGGSKGELHVWDTLLDAN
VSRKYGSKQS
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgataacggcactttcatggattccaaaagggtctttaaagcctgttcctgatgctgcc
gaacctccttcaaaggaagagatcaaagagctcattgagagtggagccttctcagctagt
gtggatgatgatagcaacgaggaagaagaagaagaagagattagtgaagttgatcatgcc
aaggctgtagctgaagcttttggtaagtcttccagtagcagcaagaaggcttcttctacg
atggaggttgatgatgtagctactggaatgaaagaactcgacatggataattacgatgaa
gaggatgatggaattgaactcttcagctctgggcgtggggacctttattatccaagtaat
gagttggatccttatctgaaggatgctactgatgatgatgatgatgaagaggatgttgat
gatacgacaatcaagccaacagattcagtgattatctgcgctaggaatgaagatgaagtc
agccatttggaggtttatgtatacgaggaatcatctgatggctctccaaacatgtatgtt
catcatcacattattatacccgagtttcccttgtgtactgcgtggatggattgtcctctt
aaaggaggggagaaaggcaattttgtagctattggctcaaaggaaacgccgacaatagag
atatgggatcttgatgttagggacgaggtgctaccttgtgtacaactgggtggagtggag
gagatggagattattaagaaaaagaagagtaagaagcagaaatacaaagaaggtagccac
actgattcagtacttggtcttgcttggaacaaggagtttcggaatatacttgctagtggt
agtgccgacaaaaaggttaaggtttgggatgtggctactggaacatgtaagataaccatg
gagcatcacacgaaggaggttcaagcagttgcatggaatcattatgctccagaagtgctt
cttagtgggtcttttgatcagactgttgtattgaaagacggaagacaaccttcacactct
ggtttcaaatggtctgtcatgtctgatgtcgaaagcttagcttgggatccccactgtgaa
cactcctttgtggtaagtcttgaggatggaaccgtgaaaggttttgatatacgcgctgca
cagtcaggttcagattctgatttaaagccaagtttcactatccaagcacatgaccaagac
aaaggagtctcctccatctcatacaacgtttctgcacctaatcttttggcgacgggttct
atggataaaacggtgaaactttgggacctttcaaacaatgagccttcatgcattgcttca
cacaaaccaaaagctggagctgtgttctccatttcattctcagtggacaaccctttcttg
cttgctattggtggctcaaagggagaactacatgtttgggacacactgttggatgccaat
gtctctcgcaagtatggaagcaaacaatcttga

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