Raphanus sativus (radish): 108821594
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Entry
108821594 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108821594
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108821594
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108821594
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
SpaA
Motif
Other DBs
NCBI-GeneID:
108821594
NCBI-ProteinID:
XP_018450099
UniProt:
A0A6J0KSP9
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Position
8:complement(7847441..7849643)
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AA seq
687 aa
AA seq
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MSPQTSYSYTKFDLEIWKRKEKMISQKKIVSSVICFLLLLLLPVAFSETTRNLKGISARA
PTVQQIKNKHGAKEVIVDNGIFRVTFSSPQGLITGIKYNEIDNVLNPRLRARGYWDITWQ
RENILPKLDRIEGTNFRIIAQNEEQVEISFSRKWNGGSDHVPLDVDKRYIIRTNTSGIYT
YGIFERQPEWPEVEMGLIRVAFKLNPDRFHYMVVADNRQRQMPTDDDRDIDSGRAKPLAY
KEAVRLTHPHNKMFKNQVDDKYQYTCEVKDNKVHGWISTKSNVGFWLISPSSEYRSGGPV
KQELTSHVGPTTLTTFISEHYVGSDMETRYKAGEAWKKVLGPVFVYLNSDSTGNNPQYSL
WEDAKRQAEQEVEAWPYGFVASSDFPTRQERGTITGRLFVNDRFLTPAGSAYVGLAPPGE
AGSWQTNTKGYQFWTQTNETGYFTIDNIRPGTYNLYGWVPGFIGDFTYQNQINVAAGSEI
SLDRVVFQPPRNGPTLWEIGLPDRTAREYFVPEPYKNTMNPLYINHTDKFRQYGLWQRYT
ELYPNHDLVYTIGVSNYSQDWFYAHVTRNIGSTYVPTTWQIVFELPYVNWRGSYTLQLAL
ASAARANLQVRFNNENSRPFFSTGNIGRDNAIARHGIHGAYHLYSIDVPGSLLRTGTNTI
YLRQSKALGPFEGLMYDYIRLEEPSTA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgcagacatcttattcttacactaaattcgatcttgagatttggaaaagaaaa
gaaaagatgatttcgcagaagaagatagtttcatcggtgatatgtttccttctgttgctt
cttcttccggtagctttttctgagacgacaaggaacttaaagggaataagtgcaagagct
ccaacagtgcagcagataaaaaacaaacatggcgctaaagaggtgatagtggacaatgga
attttcagagtgactttctcgagtcctcaaggacttataactgggatcaaatacaacgaa
atcgacaatgttcttaatccacgtctccgagctcgagggtactgggacataacatggcaa
agagaaaacattctcccaaaattggatagaatcgaaggaaccaacttcagaatcatagct
caaaacgaagaacaagtggagatttctttctctcgaaagtggaatggtggttccgatcat
gttccattagacgtagacaagagatatattatacgcacaaatacatcaggaatctacacg
tatgggatttttgagagacagcccgaatggccagaagtggagatgggtctaatccgagtc
gcgttcaaactcaaccctgatagattccattacatggtggtggcagataatcggcaaaga
caaatgccaacagacgatgaccgtgacatcgacagtggccgtgccaagccccttgcttac
aaagaggctgtacgattgactcatcctcacaataaaatgttcaaaaaccaggtggacgat
aagtatcagtacacatgtgaggtcaaggacaacaaggtgcatggttggatctcgaccaag
tccaacgttggtttctggctcatctcaccgagcagcgaataccgctctggtggaccggtc
aaacaggaactcacgtctcacgtcggtcccacgaccctcacgacctttataagcgagcat
tatgttggttcggacatggagacaaggtacaaagctggtgaagcgtggaaaaaggtcttg
ggacctgttttcgtttacttgaactctgattctaccggcaataatccacaatattcgtta
tgggaagatgctaaacgacaggctgaacaagaagttgaagcatggccgtacggttttgta
gcgtcctctgactttccaactcgtcaagaaagaggaaccattaccggtcgactctttgtc
aacgacagattcttgactccggcaggatctgcatacgtcggtttagcaccaccaggagaa
gctggttcatggcagacaaatactaagggataccaattttggacgcaaaccaacgaaacc
ggctatttcacgattgataacattagaccgggaacgtataatctatacggttgggttccc
ggttttataggagactttacataccaaaaccaaatcaacgtagctgcaggttcagagata
agtcttgatagagttgtgttccagcctcctaggaatggtccaacattgtgggagattggt
ttaccggaccgaaccgccagagaatactttgtaccggaaccatacaagaatacaatgaat
cccttatacataaaccacaccgacaagtttaggcagtacgggttatggcaacgttacaca
gagttatatccaaatcatgatcttgtctacacaattggagttagtaactatagtcaagac
tggttctacgctcatgtcacaaggaacattggttcgacctatgtaccaacgacatggcag
atcgtgtttgaacttccatatgtgaactggcgaggtagctacacattgcaactagctttg
gcctcggctgcacgggctaacttacaagtacggttcaacaatgaaaactctaggccattc
ttctcgacgggtaacatcggaagagataatgctattgcaagacatggaattcatggagcc
taccatctttatagcatcgatgtgcccggaagcttactaagaaccgggaccaacacaatc
tatctacgtcagtctaaagcgttgggaccgtttgaaggtcttatgtatgattacattcgt
cttgaagagccttctacagcttag
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