Raphanus sativus (radish): 108821654
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Entry
108821654 CDS
T06014
Name
(RefSeq) putative axial regulator YABBY 2 isoform X1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108821654
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
108821654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
HMG_box_2
HMG_box
Ccdc124
zinc_ribbon_12
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
108821654
NCBI-ProteinID:
XP_018450150
UniProt:
A0A6J0KQF7
LinkDB
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Position
8:1174853..1179119
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AA seq
188 aa
AA seq
DB search
MSIDLSSDHVCYVHCNFCTTILAVNVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSPT
PIHQDPQQHKQHITSAVTRKEYGSSSRSSNHFSTTLVESVDREAPRMPPIRPPEKRQRVP
SAYNRFIKEEIQRIKAGNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQTVA
GQKSNGYY
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtctatagatttatcatctgaccatgtttgctatgtccactgcaacttctgcaccacg
attttagcggtaaatgtaccatatgcaagtttgttcacacttgtgacggtgagatgtggc
cattgtaccaatttgctctctctaaacattggagtttcacttcatcaaacctcacctact
cctattcatcaagaccctcagcagcataagcaacacataacctctgcggtgacaaggaaa
gaatatggatcatcttctaggagctccaaccatttttcaaccacattggtagaaagtgtc
gatcgagaggcccctaggatgcctcctattcgtccgccggagaaaagacaacgcgttcct
tcggcctacaacaggttcatcaaagaggaaatccaaagaatcaaggctggcaatccagag
atcagccaccgcgaggcgtttagcacagctgctaaaaattgggcacattttcctcacatt
cactttggattaaagctggatggcaacaagaagggaaagcaattagaccagacagttgca
ggacaaaagtctaatggatactactaa
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