Raphanus sativus (radish): 108821900
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Entry
108821900 CDS
T06014
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108821900
03460 Fanconi anemia pathway
108821900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108821900
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108821900
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108821900
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108821900
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
108821900
Bloom's syndrome complex (BTR)
108821900
FA (Fanconi anemia) pathway
108821900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
108821900
NCBI-ProteinID:
XP_018450391
UniProt:
A0A6J0KS99
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MKKSPLPVQNVHRSDKNVGGGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMP
TGGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVRNKIH
EDLDSGKPSVRLLYVTPELIATKGFMLKLRKLRDRGLLNLIAIDEAHCISSWGHDFRPSY
RQLSNLRDSLADVPMLALTATAAPKVQKDVIDSLSLRNPLVLKSSFNRPNIFYEVRYKEL
IDNAYTDLCNLLKSCGNICAIIYCLERTTCDDLSLHLSSTGISSAAYHAGLQSKLRSTVL
DDWLSSKKQVIVATVAFGMGIDKKDVRMVCHFNVPKSMESFYQESGRAGRDQLPSRSVLY
YGVDDRKKMEFLLRNSENKKSPSSKKPTTSNFDQIVRYCEGSGCRRKKILESFGEEFPVQ
QCKKTCDACKNPNQVARCLEELTTTASRRHNSSRVFITSSSDNKTNEGEYSEFWNRNEDG
SNSDEEISDSDDGADAVKSIAGPKLSKKLGVDEKLVLLERAEEKYYERNKQVKKSEKNAI
SETLRESSKQRLLNELTRVLQLLGVEEIDSQNASEFLENECYRKYSKAGKSFYYSQIAST
VRWLGTASRDDLMTRLSSVVSYAKGEEPSGESLPMTEPVENIEQEDINTYATELQVDEPT
QLLVTSPSRSPIRLPEIPSFSEFVNRRKMKHSTEVSDGKKPAKIMKLQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcgccgttaccggtgcaaaacgttcaccgctcagataagaacgtcggcggc
ggaaaagaagcactggtgaagctattgagatggcatttcggccatgcagatttcagaggg
aagcagctagaggcgattcaagctgttgtatccggaagggattgcttttgcttgatgccg
acgggaggagggaaatcgatttgttatcagatacctgcgctggctaaacctggaatcgtc
cttgttgtttctcctttgattgctttgatggagaaccaagtgatggcgttgaaggagaaa
ggtattgctgctgagtatctctcgtccactcaagctacacatgttaggaacaagatccac
gaggaccttgattctggaaaaccctctgtgagattgctgtatgtaactccagaactgatt
gcgacgaaaggatttatgctgaagctgagaaagctccgtgacaggggtttactgaatctt
atagccatagacgaggcacattgcatctcatcatggggccacgacttcagacctagctat
cgtcaactttcaaacttaagagattctttggctgatgttccaatgttggctctaaccgct
actgctgctcctaaggtgcaaaaggatgtgattgactccttgagtttgcggaatcctttg
gtcctcaagtcttctttcaatcgtccaaatatcttctatgaagttcggtacaaagaactt
atagataacgcttatactgatttgtgcaacttgctcaagtcatgtggaaatatatgtgca
attatctattgccttgagcgtacaacctgtgatgacttgtctcttcatctttccagtact
gggatctcttctgctgcctatcatgcaggactccagagtaaactgagaagtactgtttta
gatgactggttgtcctcgaagaagcaagttattgttgccacagtggctttcgggatgggt
atagataagaaggacgtgagaatggtttgccacttcaacgttccaaaatcgatggaatct
ttctaccaagagtccggtagagcaggtcgggatcagctaccttcaagaagtgtattatac
tatggtgtagacgatagaaagaaaatggagtttctactgcggaactcggagaataagaaa
tctccatcctcaaagaagcctacaacatctaacttcgaccagattgtgagatactgcgaa
ggttctggatgccgacgaaaaaagattcttgagagctttggtgaagagtttcctgtgcag
caatgcaaaaaaacgtgtgatgcatgtaagaatccaaatcaagttgctcgttgcttggag
gagctcacgactaccgcctccagaagacacaactcttctcgagttttcatcaccagctcg
agtgataataagaccaatgagggggagtactccgagttctggaaccgtaatgaagacgga
agcaattccgatgaggaaatatcagattcagatgatggcgctgatgctgtcaaaagcata
gcaggacctaaactatcgaagaagcttggagttgatgagaaacttgttttactggagcgg
gctgaggagaagtactacgaaaggaataaacaggtcaaaaagtctgagaagaatgcaata
tctgaaacactaagggaatcaagcaagcagagactcttgaacgagcttacacgagtactt
caactgctcggtgtagaagagattgattcccaaaacgcatctgagtttcttgaaaacgag
tgctatagaaaatacagcaaagcagggaaatcgttttactactcacagatagcgagtact
gtgagatggttaggaaccgcaagcagagacgatctaatgacccgacttagctcagtggta
agctacgccaaaggagaagagccatcaggagaatcactcccgatgacagaaccagtcgag
aacatagagcaagaagacataaacacatacgcaaccgagctgcaggtcgatgaaccaaca
cagctgctagtgactagcccgagccgttcgcctataaggctcccagagattccgtcattc
tcagagtttgtgaaccggagaaagatgaagcattctactgaagtttctgatggcaagaaa
ccggcaaagataatgaagctacagtaa
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