Raphanus sativus (radish): 108821961
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Entry
108821961 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108821961 isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108821961
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108821961
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun
Gryzun-like
TRAPPC13_C
TRAPPC10
BatD
Motif
Other DBs
NCBI-GeneID:
108821961
NCBI-ProteinID:
XP_018450466
UniProt:
A0A6J0KSI3
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Position
8:complement(24784721..24790057)
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AA seq
1220 aa
AA seq
DB search
MATEEGTQLEQKLNEVVLEGEQQAKMIHDDDDPPRTKTTGGSKMEEEYPEELRTPPVSLV
ALFGCSELHSSITTHLHSQQPPINALAFPDFSHLPLLLAPPHDHSHSSSFRDPLSSDSSS
PTLPSGILKRDWLLKHRTKVPALVAAFFPSNHIFGDPTQWLQVCSSLDTLKSVIRPKNIK
LVVVVVQSSPHEVISEDRLLALRKRAELDSKYVLFLNHSDLPISLPRIASAFSELALSYY
REEARRIKTRIEKKSSASLDLIVRYCFKVAVYAEFRRDWGEALKFYEDAYHSLHEMIGTS
TRLPAIQRLVEIKTIAEQLHFKISTLLLHGGKLTEAVIWFHQHKSSYDKVVGSTEYVFLH
WEWMSRQFLVFAELLETSSATVQGFSSLNQGTAEIPLTEFEFYPAYYYQLAAHYLQNKKS
ALAQLLSISVAAQEIDGSSESITPSVYVGQFSQLREKGEALTLHFITDEEYIRYAISEAK
RFQDSFEIVAWLKKSYESFTNLKSRRMAAFCAFEIAREYFGSSDPSNAKFFFDIAANLYR
QEGWVSLLWEVLGYLRECSRNLGALKDFVELSLEMVALPVTSCDDFGNLRNKTYGPGGPA
TVSRRESIHREVFTLMCPETEQTTSTGENGFKLASDSPLHLEIDLVSPLRPVLLASVAFH
EQMIKPRALCSITLSLLSHLPLPVDIDHLEVQFNQSKCNFVIRNSQRPLSTVQSGSQVEN
EPSLVLVPNNWLRLTYAIKPEQSGKLECLSILAKLGPRFTICSRAESPAAMEDSPAWKHE
NRVQSLPTKDPILAVFGQKATQVEEPEPQVDVSLGASGPALVGENFTMPIVVTSKGHAVY
SGELKINLVDVGGGGLFSPREAEPFSLESHHVEICGIDGAEGNDESESETGNIKKIQQSF
GLVSVPDLKEGESWSCKLEIKWHRAKPVMLFVSLGYLPQGNEANAQKVHIHKSLQIEGKM
PLVITNRFMLPYRRDHLLLNRIKPAPDSEDISSLPLNEKSVLVVSAKNCTEVALKLMCMS
IELDDEQGKTSCLIQQGGGGGETSGSANLAPGEEFKKVFTVTPTMRTPKLSLGSVHLKWR
RQGGNTEEACVSTKHKLPEVNVDASPLVMSLNCPPYAILGESFTYAITICNQTQLLQEAK
FALADAQSFVLSGSHSNTVSVLPKSEHVLSYKLVPLTCGQQQLPKITLTSVRYSAEFQPS
TIASSVFVFPSAPQANSTAK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaagaaggtacacagttggagcagaagctcaatgaagtagtactcgaggga
gagcagcaggccaagatgatccatgatgatgatgatcccccaagaacaaaaacaacagga
ggaagtaagatggaggaggaatacccggaagagctcaggacgccgcccgtaagtctggtg
gctctcttcggatgctcagagctacactcctccattactactcatctccactcccagcag
cctcccatcaacgctctcgccttccccgacttctctcatctccctctcctccttgctcct
cctcatgatcattcccattcctcctccttcagagatcctctaagctctgattcctcctcc
cctacccttccttctggcatcttgaaacgggactggttgcttaagcatcgcaccaaggtc
cctgctcttgtcgccgccttcttcccctctaatcacatcttcggcgatcctactcaatgg
ctacaggtctgctcctctcttgacaccctcaaatccgttatccgtcccaaaaacatcaaa
cttgtggtcgttgtggtccagtcttctccccatgaggtaatcagcgaagatcgtctactc
gcattgcgaaagcgtgcagaattagattctaagtacgtcctcttcctcaaccactctgac
ctccctatctccctccccagaatcgcttctgcgttttcagagttggccctttcgtattac
agagaagaagctaggagaatcaaaactcgcatcgaaaaaaaaagttccgcttctcttgat
ttgattgttcgctattgtttcaaagtcgctgtatatgctgagtttcgtagagattggggt
gaggccttgaagttctatgaggacgcctaccattccttgcacgagatgatcggcacatca
actaggttgcctgcaatacaacgcttggtcgagattaagaccatagctgagcaattgcat
ttcaagatatctacgcttttgttgcacggtggaaagctcacagaagccgtcatatggttt
catcaacataaatcatcatatgacaaggttgttggatccactgaatatgtttttctccac
tgggaatggatgagtaggcagtttcttgtctttgctgagttgctggagacaagctcggct
actgttcagggcttttcatccttaaaccaaggaactgcagagatacctttgactgaattt
gaattttatcctgcctattattatcagttggctgctcattacttgcagaataagaaatct
gccctggcacagttgttgtcaatctccgtagcagctcaagaaattgatggcagctcagag
tctattactccttcggtctatgtgggtcagttttctcagttacgtgagaagggagaagcg
ttaacactccactttataacggatgaagagtacatacggtatgcaatttcagaagcaaag
cgatttcaggattcctttgaaattgttgcttggctgaagaaatcttatgaatcgtttacc
aaccttaaatcccggaggatggctgctttttgtgcatttgaaatagcccgggagtacttt
ggatcatctgatcctagcaacgcaaaattcttttttgatattgctgcaaacttgtacaga
caagaaggttgggtatctttgctctgggaggtattgggttacctaagggagtgttcgaga
aaccttggtgcgcttaaagattttgtagagttgtctcttgaaatggttgcactgcctgta
acatcttgtgacgactttgggaacttgagaaacaaaacatatggtcctgggggtcctgca
actgtttcaagaagagaaagtatacatcgagaagtctttactcttatgtgtcctgaaact
gagcagacaacatctaccggagaaaatggtttcaaattagccagtgatagccctcttcat
cttgagattgatctcgtcagtcctctgagacctgttctcctagcttcggttgcttttcat
gagcaaatgatcaagcctcgtgctttgtgctctattacgttgtcacttctttctcatcta
cctcttccagtcgacatagatcatctagaagttcagttcaatcaatctaagtgcaatttt
gtcatcagaaattcccagaggcctcttagcactgtgcaaagtggtagccaagtagagaat
gagccgtcgctggtgcttgtgccaaataattggttaaggttgacatatgcaatcaagcct
gagcaaagcggcaagcttgagtgtctttctattctcgcaaaattggggcctcgtttcacg
atctgttcaagagccgagagtcctgctgcaatggaggattcgcctgcctggaagcatgag
aatcgtgtgcagtctttgccaacaaaggacccaattcttgcagtctttggccagaaagct
actcaagttgaagaacctgaaccacaggtggacgtcagtctaggtgcctctggtcctgcc
ctagttggagaaaactttacgatgcctattgtggtaacctcaaagggtcatgccgtatac
agtggtgaattgaagatcaatctagttgatgtgggtggtggtggtttgtttagcccaaga
gaagcagaaccattctctttagaaagccatcatgtggaaatctgtggtattgatggggcc
gagggcaacgatgaatccgagtctgaaacaggtaacataaagaaaatacagcaatctttt
gggctggtatctgttccagacctgaaggaaggggaatcgtggtcctgcaaactagaaatc
aagtggcatagagccaagcctgttatgctttttgtgtcattgggttatttgccacaaggc
aatgaagctaatgcccagaaagttcacatacacaagagcttgcagattgaaggaaagatg
cctcttgtcattaccaatcggtttatgctgccatatagaagggatcacctattgctcaat
aggatcaagccggcccctgattctgaagacatttcttctctgccgctgaacgaaaaaagc
gtcttagttgtcagtgccaaaaattgcacagaggtagcactgaaactgatgtgcatgtcg
attgaattggatgatgagcaagggaaaacttcatgtttgattcagcaggggggtgggggt
ggagaaacctcaggttctgctaatcttgcgccaggagaagagttcaaaaaggttttcaca
gtcacaccaacaatgagaaccccgaagcttagtttgggatcagtacatttgaaatggagg
aggcagggaggtaacacagaagaagcatgtgtttcaacgaagcacaaactccctgaagta
aatgtggatgcatcaccactggtcatgagtttgaactgtcctccgtatgcaattcttgga
gaatccttcacatacgccattacaatctgcaaccagacacagttgctccaagaagcaaag
tttgctctggctgatgcacagagttttgtcctgtctgggtctcacagtaatacggtttca
gtcctacccaagtcggaacacgtcttaagttataagctagtgcccttgacttgcggtcaa
cagcaactccccaaaattactttgacatcagtgcgatattctgctgagtttcagccatct
acgattgcttcaagtgtctttgtgtttccgtcagcgccacaggccaactctactgccaag
tag
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