Raphanus sativus (radish): 108821986
Help
Entry
108821986 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108821986
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108821986
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108821986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_16
zf-RING_5
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-C3H2C3
RINGv
zf_RING_Vps8
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108821986
NCBI-ProteinID:
XP_056849215
UniProt:
A0A9W3CCL3
LinkDB
All DBs
Position
8:complement(5178577..5181177)
Genome browser
AA seq
139 aa
AA seq
DB search
MGLSQFPTASEGVLPLLVMNTVVSVTLLKNMVMSVFRIVGSDTEDSMEIEEREEDCVMRR
RRRRISITQFKSLCENRGGEENEDEEEEEGVECCVCLCGFKEEEEVSELVSCKHFFHRAC
LDNWFGNDHTTCPLCRSIL
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgggtctttcgcaatttccgacagcgtcagaaggagtgttgccgcttctggtaatgaac
acggttgtttcagttactctgctcaagaacatggtgatgtctgttttccgaattgttgga
tccgatactgaagactccatggagatagaggagcgtgaagaggattgcgtgatgaggagg
aggagaagaagaatctcgataacgcagttcaagtctttgtgtgagaacagaggaggagaa
gaaaatgaagatgaagaagaagaggaaggagtagagtgttgtgtgtgtctttgtgggttt
aaagaggaagaggaagtgagtgaactggtttcttgcaagcatttcttccacagagcttgt
ttagacaactggtttggtaatgatcacacaacctgtcctctttgcagatccattctctag
DBGET
integrated database retrieval system
