KEGG   Raphanus sativus (radish): 108821994
Entry
108821994         CDS       T06014                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108821994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108821994
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108821994
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_NXF1-5 MAS20 LRR_8
Other DBs
NCBI-GeneID: 108821994
NCBI-ProteinID: XP_018450510
UniProt: A0A6J0KRF8
LinkDB
Position
8:4030499..4032768
AA seq 421 aa
MAGSFACVFTSEKRKRKKHFLIKIQRKQSKNPETETKKLNSKDQETRFTLKSFIKKEMVM
VVGETSMELDQCFQMMMMKMEGVSIKEWKDIPVELLMRILSLVDDRNVIAASGVCCGWRD
AISLGLTRLRLSWCNNNMNSLVLSLAPKIVKLQTLILRQDKPQLEDNAVEAIANHCHELQ
ELDLSKSLRLTDRSLYALAHGCPNLTKLNLSGCTSFSDKAIAYLTRSCRNLKVLNLCGCV
NAVSDYTLEAIGNNCNQMQSLNLGWCEKISDDGVMSLAYGCPDLRTLDLCGCVLITDESV
VALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKQPGQWKSSAKKSKYDEEGLRSLN
ISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRAVVPHSAA
H
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcaggcagctttgcttgtgtattcacttcagaaaaaagaaaaagaaaaaaacacttt
ttaattaaaattcaaaggaaacagagcaaaaacccagaaacagagacgaaaaaactaaat
tcaaaggatcaagagacccgcttcactttaaagagttttataaaaaaagagatggtgatg
gtagtaggagaaacatccatggagctagaccagtgctttcagatgatgatgatgaagatg
gaaggagtctcgatcaaagagtggaaagacatccctgttgagcttctcatgagaatcctc
tcccttgttgatgatcggaatgtcattgctgcttctggtgtttgctgtggttggagagat
gccatctctcttggtctcactcgtctccgtctctcttggtgcaacaacaacatgaacagc
ttagttctttctctcgctcccaagattgtaaagctgcagactttgatactgcgtcaggac
aaaccacaactagaggacaatgcagtggaggccatagcgaatcactgccatgagctacaa
gagctcgatctcagcaaaagcttgagactaaccgatcgttccctctatgcacttgctcat
ggttgccctaacctcactaaactcaaccttagcggctgcacctcgttcagcgacaaagct
attgcgtatctgaccaggtcctgcagaaacctgaaagttctcaatctctgtggatgcgtc
aacgctgtttctgactacaccttggaggctattgggaacaattgcaatcagatgcagtca
ctaaacttgggatggtgtgagaagatcagtgatgatggagttatgagtttagcttatggc
tgccctgatctcaggactctggacttgtgtggttgtgttctcattacagatgagagtgtg
gtagctttagctgattggtgtgtccacttgaggtccctggggctatactactgcagaaac
ataacagacagagccatgtactcgctagctcaaagcggggtgaagaacaaacaaccgggg
caatggaaatcatcagctaagaagagcaaatacgatgaagaagggctgagaagtctcaac
atcagccagtgcactgcactcacaccttcggctgttcaagcggtctgcgatacgttccct
gctcttcacacgtgttcgggaagacattcgcttgtgatgagcgggtgtttgaacttgacg
tctgtgcactgtgcttgtattcttcaggctcatcgcgcggttgttcctcactctgctgct
cactga

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