Raphanus sativus (radish): 108822116
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Entry
108822116 CDS
T06014
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108822116
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108822116
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108822116
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108822116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT_2
Coatomer_g_Cpla
HEAT
RAG2
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
108822116
NCBI-ProteinID:
XP_018450638
UniProt:
A0A6J0KU59
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All DBs
Position
8:9862224..9866792
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AA seq
948 aa
AA seq
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MDKSSTLLVHYDKGTPAVAKEIKEALEGNDVEAKVDAMKKAVMLLLNGETIPQLFITIIR
YVLPSEDHTIQKLLLLYLELIEKTDSRGKVLPEMILICQNLRNNLMHPNEYIRGVTLRFL
CRLKETEIVEPLTPSVLQNLEHRHPFVRRNAILAVMSIYKLPHGEQLFVDAPEMIEKALS
TEQDPSAKRNAFLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPSEK
GKYIKIIISLLSATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILL
DRLSELKSSHRDIMVELIIDVLRVLSSPNLDIRRKTLDIALDLITHHNINEVVQVLKKEV
VKTQSGELEKNGEYRQMLIQAIHACAVKFPEVASTVVHLLMDFLGDSNVASALDVISFVR
EIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTIKQCLGD
LPFYSVSEESEPTETSKKIQPTSSAMVSSRKPVILADGTYATQSAASETTFSTPAVVQGA
LTSGNLRALLLTGDFFLGSVVACTLTKLVLRLEEVQSSKTEVNKTVTQALLIMVSMLQLG
QSPASPHPIDNDSYERIVLCIKLLCHRKDEMKKIWLESCRQSFVKMISEKQLREMEELKA
KTQTTHAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRILQL
TGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKLVERPQNYSLAP
ATSMQIKANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPAVCSDVAF
RTMWAEFEWENKVAVNTKIENEREFLDHIIKSTNMKCLTGPSELDGECGFLAANLYAKSV
FGEDALVNVSIEKQTDGALSGYIRIRSKTQGIALSLGDKITLKQKGSN
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatctagtaccttgctcgtacactacgacaaagggactccagcagttgccaag
gagattaaagaagctctagaagggaacgatgtggaagcaaaagttgatgccatgaagaag
gcggttatgcttttgctgaacggcgaaaccattcctcagcttttcataactattattaga
tacgtgctgccttccgaggaccacacgatccaaaagcttctgctgctgtacctggagctg
attgagaaaacagattccagagggaaggtgctgcctgagatgattttgatttgccagaat
cttcggaacaaccttatgcatcctaatgagtacattcgcggagtgacgctgaggtttctc
tgccggttgaaggagactgaaatagtggagcctttgactccatcagtgttgcagaatctg
gagcaccgccatccttttgtacgtaggaatgcaattctggccgtcatgtcgatctataag
cttccacatggtgagcagctcttcgtggatgcacctgaaatgatcgagaaagctttgtca
acagaacaagatccgtctgccaagagaaatgcgtttctgatgctttttacgtgtgctgag
gaacgagctgtgaattatcttctgagcaatgttgacaaggtttcagactggaatgagtcg
cttcagatggtggtgctggagctgattcgaagtgtgtgtaagactaaaccatcggagaag
gggaaatatattaagattattatttctctgttgagtgccacttcctctgcagttatctat
gaatgtgctgggacgcttgtttctctctcatctgcccctactgctattagggctgctgcc
aacacctactgtcaacttcttctttctcagagtgacaacaatgtgaagctcattttgctc
gatcggttgagtgagcttaagtcatcgcacagagatatcatggttgagctaataatagat
gtgctcagagtactctcaagcccgaaccttgatattcgcaggaagacacttgacattgct
cttgatttgattactcatcataacattaatgaggtcgttcaagtgttgaagaaagaagtt
gtgaagacacagagtggagagcttgagaagaatggagagtacagacaaatgcttattcaa
gcaatccatgcctgtgcagttaagttccccgaagttgcaagcaccgtggtccatcttcta
atggatttcttgggagatagcaatgtggcttcagcacttgacgtgatttcatttgttaga
gagataatagaaacaaatcccaagttgagagtttcaatcataaccaggttgctggacacg
ttctatcagatccgcgcaggaaaggtctgcccttgtgcactgtggattattggggagtat
tgcctttcactttcggaagttgagagtggcatttcaaccattaagcaatgccttggtgat
ttaccattctactctgtctccgaagaatctgagccaactgagacttcgaagaagattcag
ccaacctcttccgctatggtgtcctctagaaagcctgtgattcttgctgatggtacttat
gctacccaaagcgcggcctctgaaaccacattctcaacaccagcagttgttcagggagca
ttgacttctggaaatttgagagcactgcttctaactggcgattttttcctaggatcagtg
gttgcttgcacgttgaccaaacttgttctcaggttggaggaggttcagtcatccaaaact
gaagtgaacaagacagtcacacaggctttgctgatcatggtttccatgttgcaactcggg
caatctcctgcttccccacaccctattgataatgattcttatgagaggattgtgttgtgc
ataaaattgctttgccataggaaagatgagatgaaaaagatatggttggaatcctgccgc
cagagttttgtcaagatgatttctgaaaaacaacttagagagatggaggaacttaaggca
aagacccagacaactcatgctcagcctgatgatctaattgacttcttccatctaaagagc
cggaagggaatgagtcaacttgagttggaagaccaggtacaagatgacttgaagcgtgct
actggagagttcacaaaggacgagaacgatgcgaacaaactcaaccgtattcttcaactc
acaggattcagtgatccagtctatgctgaagcatatgtgacagtccatcactacgacatc
gcactcgaggttaccgttatcaaccgtacaaaggaaactcttcagaatctgtgcttggaa
ttagcaaccatgggtgatctcaagcttgttgagcgtcctcaaaattatagccttgcacct
gcaacgagcatgcagataaaagcaaacatcaaggtctcgtccacagagaccggagtcata
ttcgggaacatcgtctatgagacatcaaatgttatggagcgaaacgtggtggtactaaac
gacattcacatcgatatcatggattatatctcccctgctgtttgctcggatgttgctttc
agaaccatgtgggcagagtttgaatgggaaaacaaggttgctgtgaacaccaagattgag
aacgaaagagagttcctcgaccacattatcaaatccacaaacatgaagtgtctcactggc
ccatctgaactagacggagaatgtgggttccttgcagcaaacttatacgcaaaaagtgtg
tttggtgaggatgctctagtgaatgtgagtatcgagaagcaaacggacggagcattgagt
ggctacataaggataaggagcaagacgcaagggattgcgctaagtcttggagacaaaatc
accctcaaacaaaagggtagcaactga
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