Raphanus sativus (radish): 108822170
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Entry
108822170 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108822170
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108822170
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108822170
Membrane trafficking [BR:
rsz04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108822170
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
108822170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
108822170
NCBI-ProteinID:
XP_056853456
UniProt:
A0A9W3CPN7
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MTESMWSHDQPSPQPSPKPVARQRSRSIFRLLVQREISPKTKSVPRKRWGVSRRCVTAAD
SPCGTSREPVSEQRHNLISWVEAESLQHLSATYCPLMPPPRSTIAAAFSSDGRTLASTHG
DHTVKIIDCETGKCLKVLSGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTSDCIRS
HDFYRPIASIAFHAEGDILAVASGHKLHIWHYDKTGEDSTPAIVLKTRRSLRAVHFHPHG
VPLLLTAEVTDIDSPDSAMTRATSPGYLRYPPPAIFFTNTQSGSHTSMAAELPLVPLPYL
LLPSYSPDDPRIQHSTATTGPRSAPSRFQSNQSSVEHGSSRTMSTPPPPPLPLAMSGDLA
GSPHVPENSLARARASTTAVDAMDIDEAQPVGGNRIPRQVSSQSDLLDFGQFQQLFHSRD
RVSWELPFLQGWLMAQSQAGVLPTGGSGTAPPHAGSSSASHSSTASLEAAVASLEIPGGV
NLYGVSASGHTRDRTRFAGSGLAGGLPSRNAQQEGTEAQPVVNRLPSELATSIAAAELPC
TVKLRVWSHDIKDPCAILRSDKCRLAIHHAVLCSEMGAHFSPCGKYLAACVACVIPHAEA
DPGLQTLVQQDSGLATSPTRHPVTAHQVMYELRVYSLEKET
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatctatgtggtcacacgatcaaccttctcctcagccctcaccaaaaccagtg
gctcgccaaaggtctaggagcatcttcaggttactggttcagagagagatttcacctaaa
acaaagtctgtgccacggaaacgatggggagttagccgccgatgtgttactgctgctgat
tcaccctgtggaaccagtagggaacctgtgagcgagcagagacataatcttatttcatgg
gttgaggcagagtcattgcagcatttgtctgctacctactgtcctcttatgcctcctccg
aggtcaactattgcagccgcttttagttctgatggaagaactcttgcttctacgcatggt
gaccacactgttaagattattgactgtgagactggaaaatgcttaaaagttctgagcggc
caccggaggacaccatgggtggtcagattccacccacgccactcagaaatagttgctagt
ggaagtttagatcatgaggtgcgcttgtggaatgcaaaaacttcagattgtattagatct
catgatttctatcgacctattgcttctatagctttccacgctgaaggtgatatacttgct
gttgcatctggtcataagttgcacatatggcattacgataagacaggggaggactcaaca
ccagcaattgttttgaagacgaggcgctccctgagagctgtacactttcatccacatggg
gttcctcttctcttgactgcagaggtgactgacattgattcaccagattccgcaatgact
agagcaacatctccaggctatttgcgatatccacctcctgctattttcttcaccaacacg
cagagtggcagtcatactagtatggcagcggaactgccacttgtgccgttaccgtacttg
cttttgccttcatattctcctgatgatccaagaatccaacattccactgctactactggt
ccaaggagtgctccatcaaggtttcagagtaatcaaagttcagtagaacacggcagcagc
agaacaatgtctactcctccacctcctcctcttcccttggctatgtccggcgatcttgct
ggatcccctcatgtcccagaaaactccctagctagagctagagcttcgaccacagctgtt
gatgctatggatatagacgaagctcaacctgttggaggaaatagaattcccaggcaagtg
tcaagtcagtcagatttacttgattttggacaatttcagcaattatttcactccagagac
agagtttcgtgggagttaccttttctacaagggtggttgatggctcaaagccaggctggt
gttcttcctactggtggtagtggcacagctcctcctcatgcaggttcttcttcagcatct
cattcatccacagccagtctagaggctgcagtggcgtcattagaaattcctggtggtgtt
aacttatatggagtttctgcaagcggccacaccagggaccgaacccgcttcgcaggatct
ggtttagcaggaggtcttccctctcgtaacgctcaacaggaaggaactgaagctcaacct
gtggtgaacagactcccgtctgaactggctacttccattgctgctgcagagttgccttgt
actgtcaaacttagagtgtggtcacatgacatcaaagacccatgtgcaatactaaggtcc
gacaagtgccgattagcaatacatcacgctgttctttgcagtgaaatgggagctcatttt
tctccatgtgggaaatatttagcggcctgtgtagcatgtgttattcctcatgctgaggca
gatcctggtttgcagactctggtccaacaagattcaggccttgcaacttcccctactcgg
catcctgtcacagcacatcaagtcatgtatgaacttcgtgtgtattctctcgaaaaggaa
acgtaa
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integrated database retrieval system
