Raphanus sativus (radish): 108822172
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Entry
108822172 CDS
T06014
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a
KO
K14972
PAX-interacting protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108822172
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
108822172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
Med15_N
Motif
Other DBs
NCBI-GeneID:
108822172
NCBI-ProteinID:
XP_018450701
UniProt:
A0A6J0KT54
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All DBs
Position
8:complement(2811467..2817614)
Genome browser
AA seq
1353 aa
AA seq
DB search
MDNNNWRPSLPNGDPAMETGDWRAQLPPDSRQKIVNKIMETLKKHLPYSGPEGINELRRI
AARFEEKIFSGAVNQTDYLRKISMKMLTMETKSQNAAGSSSSIPAANNGTSMDSMPTNQG
NLLPGTLPNNQSQAPQPLLPQTMQNNTASGMMGSSALPSSMPPVSSITHNNNVTNVVNQN
SNMQNVAGMLQDSSGQHGLSSNNMYSGSQRQMMGRPHDMSSQQQQQQQQQQQPQSAQYLY
QQQLQQQLLKQNFQSGNVPNPSSLLPSHMQQQQQQQNVLQPNQMHSSQQSGIPTSATQPS
SVSSAPLQGLHTNQQSSPQLPGQQTTTQAMLRQHQSSLLRQHPQSQQASGIHQQQTSLPQ
QSISPLQQQQSQMIRQQAANSSGIQQKQMMGQHLVGDMQQQHQQRLLNQQNNMMNMQQQQ
TQQQPLQQKQQPPAQQLINQQNSLQATHQQPLGTQSNVTGLQQSNVTGLQQPQQQLLNSQ
VGNSNLQANQQSVHMLSQPTGMQRTHQAGHGMFPSQGQQSQNQPSQQQMMPLQSHHQLGL
QQQPNLLQQDVQQRLQSSGQVTGSLLPPQNVVDHQRQLYQSQRALPEMPSSSLDSTAQTE
NANGVDWQEEAFQKIKTMKEAYLPDLNEIYQRVTAKLQQDSLPQQQRSEQFEKLKQFKTM
LERMIQFLSVSKSNIVPALKDKVTFYEKQIITFLNMHRPRKPVQQGQLPQSQMQPMQQQQ
SQNVQDQSHDSQTNPQMQSMSMPGSSGQRAQQSSLTNMQNSLLSSRPGVSAPQQNIPSSI
PASSLESGQGNALNNGQQIALGSMQQNTPQQVNNSSVSTQSGLSTLQSNVNQTQLSSSLL
QQQHMKQQQDQQMTQQFKQQLQQRQMQQQQQLLQKQQIIQQQLQARQQGAQNDMNDSTAR
QGMNVGRGMFQQHSLQGQRANYPLQQLKPGSQLPVTSPQLMQGASPQMIQQHMSPQIDQK
NVMSSVNKMGTPLQPANSPFIVPSPSTPLAPSPMQVNSEKPSGASSLSMGNTARHQATGM
QGVVQSLAIGTPGISASPLLQEFDGNNLNPLISTSGKPSGTELPMERLIRVVKSISPQAL
SSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDLVAMTKCRLQARNFMTQEGMMATKKMK
RHTTAMPLSVSSLEGSVGDNYKQFACSGTSDLESTATSDGKKARTETEHALLEEIKEINQ
RLIDTVVEISDDEDGADLSEGATARKGCEGTTVKFSFIAVSLSPALKAHLSSTQMSPIQP
LRLLVPCSYPNGSPSLLDKLPVETSKENEDLSSKAMARFNILLRSLSQPMSLKDIAKTWD
SCARTVICEYAQQFGGGTFSSKYGTWEKYVAAS
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggataataacaattggaggccttctcttccaaatggagatcctgccatggaaactggt
gactggagagctcaacttccacctgattctcgccagaagattgtgaacaagataatggaa
acactaaagaagcaccttccatattctggaccagaagggataaatgagctcaggaggatt
gctgccagattcgaggagaaaattttcagcggcgctgttaaccagactgattaccttcgg
aaaatatccatgaagatgctgactatggagactaaatcgcaaaatgcagctggctcttcc
tcatctatccctgccgctaataatggcacatctatggattcaatgcctaccaatcaaggg
aaccttcttccaggaacgttaccaaacaatcaatctcaagcacctcagccgttgctgccc
caaaccatgcagaacaatacagcctctggaatgatgggttcttctgctttaccatcctcc
atgccgccggtttcttccataacccataataataacgtcacaaacgttgtgaaccagaat
tccaatatgcaaaatgtagccggaatgttgcaagattcatctgggcaacatggcctttca
tcgaacaacatgtattctggatcccaaaggcagatgatgggcaggccgcatgatatgtct
tcacagcagcagcagcagcagcagcagcaacagcagcctcagagtgcacaatatctttat
cagcaacagctacagcagcaacttctcaagcagaattttcagtcagggaatgttcctaat
cccagttcgcttttgccatcacacatgcaacaacagcagcaacaacaaaatgtgctgcag
cctaatcaaatgcattcgtctcagcagtctggtattccaacatctgcgacgcagccctcc
tctgtgagctcagctcctctacagggtctccacacaaatcagcaatcaagtccccaatta
cctgggcagcagactacgacacaggctatgcttcgtcagcatcaatcttcgctgctaagg
caacatccgcaatcacaacaagcctctggaatccatcagcagcaaacttcattgccgcag
cagtcaatttctcctctacaacagcagcaatcccaaatgatacggcaacaagctgcaaat
agctcagggatccaacagaagcagatgatgggacagcatcttgttggggatatgcaacag
caacatcagcaaaggttattgaaccaacaaaataatatgatgaacatgcaacagcagcag
acccagcagcaaccgctgcagcagaagcaacagccaccggcccagcaattgattaatcaa
caaaacagccttcaggctacgcatcagcaaccgctgggcactcaaagcaatgttaccgga
ttgcagcaaagcaatgttaccggattgcagcaaccacaacaacagttactcaattcccag
gttggcaattcgaacttgcaggctaaccagcagtcggtgcacatgttatcacagccaacg
gggatgcaacgaacacatcaggctggccatggcatgtttccttctcagggccaacagtcg
cagaatcaaccatcccaacagcagatgatgccccttcagtcgcatcatcagttaggtttg
caacagcaacctaatctgctacaacaggatgtgcaacaaaggctacaatcttcaggccaa
gtcacaggttccctgcttccacctcaaaatgtcgtggaccaccagagacaactatatcaa
tcccaaagagcccttccagagatgccatcgtcatcgcttgactcgacggcacagacggaa
aatgcaaacggagttgattggcaagaggaggctttccaaaagatcaaaacaatgaaagag
gcgtacttgccagatcttaatgaaatctatcagagagttacagccaagttgcagcaagat
tctcttccacagcaacaaagatcagagcagtttgagaaattgaaacaattcaagacaatg
ttggaacgaatgatacaattcctatccgtttcaaagagcaatatcgtgcctgcattaaag
gataaggtgactttttatgagaagcagattataactttcttaaatatgcacagaccgagg
aaaccagtacagcaagggcagcttccgcaatctcagatgcagcctatgcagcaacaacag
tcgcagaacgttcaagatcagtctcatgatagtcaaacaaatccgcagatgcaatcaatg
agtatgccgggttcttctgggcaaagggcacaacagagtagtctgacaaatatgcagaac
agtcttctatcatctcgtcctggagtttcagctccacagcagaacattccaagttccata
ccagcttctagtctagagtcaggccaaggtaatgcactgaacaatggccagcagattgcc
ctgggatccatgcaacaaaatactcctcaacaagtaaataacagttctgtatctactcaa
agtgggttaagtacactgcagtctaatgttaatcaaacccagttaagttctagtttgctt
cagcaacaacacatgaaacaacagcaagaccaacaaatgacgcagcagttcaaacagcag
ttgcaacagcgtcagatgcagcagcagcagcagctgctacagaagcagcagataattcag
caacagctgcaagcaagacagcaaggggcgcaaaatgatatgaatgattcgacagcgagg
cagggaatgaatgtcggccgtgggatgtttcagcaacattctctgcagggtcagcgtgct
aattatccccttcaacagttaaaaccaggatcccagcttcctgttacgtcgcctcaactt
atgcaaggtgcatctcctcagatgatacaacaacatatgtctcctcagatcgaccagaaa
aatgtgatgtcatctgtcaacaagatgggaactccattgcaacctgcaaactcccctttt
attgtcccatctccttcaacccccttggcaccgtcccctatgcaagttaactctgagaaa
ccttctggagcttcttcgttgtcaatgggaaatactgcacgccaccaagcaactggcatg
caaggtgtagttcagtcccttgcaattggcactccagggatctctgcctctcctctcctt
caggagtttgatggaaataatttaaatcctttgataagtacatctggaaaaccaagtggg
actgagttgcctatggaacgccttatcagagtcgtgaagtccatctcaccacaagcactt
tcttctgcagtaagcgacatcggatctgttgtaagcatggttgatagaatagctggttca
gccccaggaaacggttcaagagcttcagttggcgaggacttggttgcaatgactaagtgt
cgcctccaagcaagaaacttcatgacgcaagagggaatgatggcgaccaagaaaatgaag
cgtcacacaaccgcgatgccattaagcgtttcttcgttagaaggaagcgttggtgacaac
tacaagcagtttgcatgttcgggaacatcagatctggaatctactgcgacttctgatggc
aagaaggcaagaactgagaccgagcatgccctattggaggaaatcaaggaaataaaccag
cggctgatagatacagttgttgagattagtgatgatgaagatggtgctgatctgagtgag
ggagcaacagcaaggaaagggtgtgaaggaacaacagtaaaattttcgtttatagctgtt
tctctcagcccagcattgaaggctcatctctcatcaacccaaatgtctcctattcaacca
ttgcgtctgctagtcccttgtagctaccccaacggctctccatctctcctggacaaactc
ccggtcgaaaccagcaaagagaacgaggacctctcatcaaaagctatggcaagattcaac
atattgctaagaagtttgtcacagccgatgtcgctcaaagacatagccaagacatgggac
tcttgcgctcggacggtgatctgcgagtacgcacagcagtttggtggtggaactttcagc
tcaaagtacggtacctgggagaaatatgtagccgcttcctga
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