Raphanus sativus (radish): 108822226
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Entry
108822226 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108822226
KO
K10891
fanconi anemia group D2 protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108822226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108822226
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
108822226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
108822226
NCBI-ProteinID:
XP_056848752
UniProt:
A0A9W3CBA6
LinkDB
All DBs
Position
8:complement(14801320..14845844)
Genome browser
AA seq
1476 aa
AA seq
DB search
MVFLSRKKPPPPPSSSSPAAPPPKFPQPQEKSTVEPDAVEKMTAILAEAGCTLNNPYGPP
CLPSDLHSFRRHLTTRFSSFSAAERDSVSDLRSVFVSGFSSYIQSPSNLRRVLSSASSTK
RDETLLRNLLLVSPIQLDLQETLLEKLPEYFDVVSGCSLEEDVARLIINHFRWLDFIVSP
DVFTDKLMEVLSISPPHLKKEIIGSLPEIIGDHISPAVVDSLEKMLQEDSSVVVPVLDSF
SNLNLDDQLQEQALTVAISCIRTIDAEHMPYLIRFLLLAATQANVRRIISQIRQQLKFTG
MSQPCASQNKLKGKAPAYDSEGSILHALRSSLRFKNILCQEIMKELNSLEKPRDFKVIDV
WLLILMYMNGDPIRKSIEKIFKKKVVDGCIQEALFDQCISGNKEFVKDNFGSFISLAEHL
LSCKEDKAREFGSHIYTRLFEGFADNYSRQEILGALVTHVGSDNEFEVSSVLEMMTVLAK
KYAQQLLPFSSHINGILDYLEGFTVENLHKVYEVFSLLALSARTSPDSFRSSISNELMMI
VRKQVSHPDLKYKKMGLVGTLRIISSLGDANSVPDCSSSQVSDCGEILELLKTSVDSCRQ
SNLALIIFYDEFAAILSHKLLQPEIMEWIGKHLGEFESLFLADIDNGEMADKSSYSGLEG
DLWMNLDGSISPICLNILALASSSSESCCLQILPSNFLLLSSVERLTNNGSLAGIDALLG
CPLHLPSSKYFAAAGWQSLTKKQREILSLSLYYAANWIRELLNAFSSQIDKRDGCISQAT
EKDVTTKLLKRLRNLIFLESLLSNLITLSPQSLPELHPYSATSEQTEHPERKNEKRKLQD
DASQRKGNMKNKLKKPKQSNVDEHLRQPTILDAFKKAGVVTSQTQLHENPSPSSLDCRTA
SGSTHETCSSDESLSVKIPQVSPALAAQRFKFRPLLPQCLSILKFPKVQSQDIRSPEYKA
ELPLYLYLLQDLHTKLDSLVPPGKQLPFKRGSPPGSFRRFRLVELFSQIKGLFPSLRMHL
NIAMSLLIKGEETSQTIWRDEFAKAGNPITSNIVVSESLIYTMVCKEVLFCFSKMLTLPG
FETDKSLLLDLLEAFQPTEIPVASFPDLQPFPSPGTKDYMYIGVYCFFEDILSNACSFSF
DLAFECLLTLQLVVTSAQKNIGKVSEGATKKRDAGPIQVLVSSLHAKLGTSAEKLLRNEW
IDESTDNKGLKNKGEMVQNILRIYLETSGSPSDLLNELACTTLPQASLSKSTGEDDAHDH
EFPTLCSATFRGWYKTLHEENLAILNKLVKAVSSEKRQNCQSEATETHLKDIQKTVNVIV
SLVNLCRSHEKVTIHGMAIKYGGKFVDSFLKVFDFLEAHFQDHNELVIQLVKDLQKATRT
LQTLCSEAKGMKQTAITSKIPATKRSLERFLFHVKALLHTTSRGSNFWMGSLKHKDLRGQ
IVSSQAYVDNETYEVEEETMSGGEDPMEADELPLSP
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctctctcgcaaaaagcctccaccgcctccctcatcttcctccccagctgct
ccgcctcccaaattcccccagccgcaagagaaatccaccgtcgaacccgacgcggtggag
aagatgactgcgattctagcggaagctggctgcacactgaacaacccctacggtcctcca
tgtctcccctccgatctccactccttccgccgccatctcaccactcgcttttcgtctttc
tccgccgccgagagagatagcgtcagtgatctccgctcagttttcgtatctggattctca
tcgtacattcaatctccgagtaatcttcgtagagtgctttcctctgcttcatcaacaaag
agagacgagacattactccgtaacctcctccttgtatctcccatccaactcgatctacaa
gaaacgctactcgagaagcttccggagtacttcgacgtcgtttcgggatgttccctcgag
gaggatgttgctcgccttatcatcaaccatttccgttggctcgacttcatcgttagtccc
gatgtgttcaccgataagctgatggaagttctatcgatctctcctccgcacttgaagaag
gagatcattggatcgttgccggagattatcggtgatcacatctcgcccgctgtggttgat
tctctagagaagatgcttcaggaggattcttccgttgttgttccagtgcttgattctttc
tctaatctcaatttagatgatcaattgcaagaacaggcgcttacggtagcgatatcgtgt
attagaacaatcgacgcagagcatatgccttatctaattaggttcttgcttcttgctgct
actcaagcaaatgttagaagaataatctctcagatacgccaacagttgaagttcaccgga
atgtcacaaccttgtgcttctcaaaataagctcaaaggaaaagcgcctgcatacgattca
gaaggttctattctccatgctctgagatcaagccttcgatttaagaacatactctgtcaa
gaaattatgaaggagctgaatagtctggagaaacctcgagatttcaaggtaatcgatgta
tggctgcttattctcatgtatatgaatggggatcccatcaggaagagcatcgagaagata
tttaagaagaaagtggttgatggatgcatacaagaagccttgtttgatcaatgtataagt
ggcaataaagagtttgtgaaggataattttgggtcgtttatttctttggccgaacacctc
ttatcatgcaaagaagacaaggcaagggagtttggctctcatatctatactcgccttttt
gaagggtttgctgacaattattcaagacaagagatactaggtgccttagtgacacatgtg
ggatctgataacgaatttgaggtcagttcagtcctagagatgatgacggttctggcaaaa
aaatatgcacagcaactccttcccttttcttctcacataaatggtattttggactactta
gagggatttactgtggaaaatttgcataaggtctatgaggttttcagtctactcgcacta
tcagctcgtacaagtcctgattcttttcgatcttcaatttcaaatgaacttatgatgata
gtaaggaagcaggttagtcatccagacctcaagtacaaaaagatgggcttagttggaacg
ctaaggattatttcatcacttggggatgcaaacagtgttcctgactgttcatcatctcag
gtttcagattgtggggaaattttggagctcttaaagacatctgtagactcttgcagacag
tctaacttagccctaattattttctatgatgagttcgctgcaattctcagccataaacta
cttcagccagaaattatggagtggattgggaagcatctgggagaatttgagtcactattt
ctagccgatattgacaacggagaaatggctgataagagttcatattctggactagaaggg
gatctctggatgaacttggatggtagtatatcaccaatctgtttgaacattttggccctg
gcatcttcatcctcagagtcttgttgtctgcagattcttccttcaaattttcttttgcta
tcatctgttgagaggttgacaaataatggatcccttgctggaattgatgctctgctcgga
tgccctttgcaccttccttcttccaagtactttgctgcagctggatggcaatctttaaca
aaaaagcagagagaaatcctctctctctctttatattatgctgcaaactggatacgagaa
ctccttaacgccttcagttcccaaattgacaaaagggatggctgcattagtcaggctaca
gaaaaggatgtaacaacaaagcttctgaagcgactcagaaatctaatattcctggaaagc
ttattgagcaatttgattacgctatctcctcagtctctaccggagctccacccttattca
gccacaagcgaacaaactgagcatccagagaggaaaaatgagaagaggaaactacaagat
gatgcttcccaacgcaagggaaacatgaaaaataaattgaaaaagccaaagcagtcaaat
gttgatgaacacttgcgacagccaactattttggacgctttcaagaaagcaggagtagtc
acgagtcaaacacagctacatgaaaatccttccccctcatcgttagattgcaggacagcg
tcagggtcaacgcatgaaacttgttctagtgatgaatctctaagtgtaaagattcctcaa
gtttccccggcccttgcagcccaaagattcaaattcaggcctcttcttcctcaatgcctt
tccatcctaaaatttccaaaggtgcagagccaagatatacgaagccctgaatataaagct
gagctacccctgtatttgtatcttttgcaagatcttcataccaagctggatagtcttgtt
cctcctggtaaacaacttcctttcaaacgtggaagccctccaggtagtttccggaggttc
agattggttgaacttttcagtcaaataaaaggactttttccaagcctcaggatgcatttg
aatatagcaatgtccttgctcataaaaggtgaggaaacttctcaaactatttggagagat
gagtttgctaaggctggaaatccaatcacatccaatatagtggtttctgaatctctgatt
tatacaatggtgtgcaaagaagttttattctgtttcagcaagatgttgaccctccctggg
tttgaaacagacaaatcgctgctgctggatcttctggaagcgttccagcccacagaaatt
ccagttgctagcttcccagatttgcaacctttcccttcacctggaacaaaggactacatg
tatattggtgtttattgtttctttgaagatattttaagcaacgcttgttccttctcgttt
gatctggccttcgaatgtcttctcaccctacagttagtggtgacctctgcacagaaaaat
attggtaaggtatctgaaggagctactaagaaaagagatgcaggtcccattcaggttctt
gtatccagtctgcatgccaaactgggaacttcggctgagaaacttctcaggaatgaatgg
atagatgaaagtactgataataagggtttgaagaacaaaggtgaaatggtgcagaacata
ttgcgaatatatctggaaaccagtggatccccatctgatttgctcaatgaacttgcttgt
accactttgccacaggcctctctatccaagtcaacaggagaagatgatgctcatgatcat
gaattccctacactatgttcagcgactttcagaggatggtacaagacattgcatgaagaa
aatcttgcaattctcaacaaactggtgaaggctgttagctcagagaaacgacaaaactgt
cagtctgaagctaccgaaacacacttaaaagacattcagaagactgtaaatgtgatagtg
tctttagtcaacttgtgtcgctcgcatgaaaaggttactatccacggaatggctatcaag
tatggcgggaagttcgtggactcatttctaaaagtttttgatttcctggaagcacatttt
caagatcataacgaattagtcatccagctggtcaaagatctccaaaaggctacaagaaca
ttacagactctatgttctgaagctaagggtatgaaacaaacagccatcaccagcaaaata
ccagcaacaaagagatctttagagcgctttctgtttcacgtgaaggctcttctccataca
acatcacgcggctccaacttctggatgggtagcttgaaacacaaggacttgagagggcaa
atagtgagttctcaggcttatgtagataacgaaacatatgaggtagaagaagaaaccatg
tccggaggagaagatcccatggaagcggatgaacttcccttgtcaccttaa
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integrated database retrieval system
