Raphanus sativus (radish): 108822359
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Entry
108822359 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108822359
KO
K14791
periodic tryptophan protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108822359
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Other 90S particles
108822359
Pre-60S particles
Other pre-60S particles
108822359
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
DSE1_N
WD40_Gbeta
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_NOL10_N
EIF3I
PAC11
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
WD_LRWD1
Beta-prop_Nup120_160
DNAI3_WD
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
108822359
NCBI-ProteinID:
XP_018450916
UniProt:
A0A6J0KTS7
LinkDB
All DBs
Position
2:31063141..31066585
Genome browser
AA seq
498 aa
AA seq
DB search
MITALSWIPKGSLKAVPDAAEPPSKEEIKELIESGAFVGSVDGSNEDEEEMEEEEEVGGD
QISEVDRAKAVAEAFGKSSNTKSSSMEVDEVAAAMKELDMDNYDEEDDGIELFSSGNGDL
FYASNELDPYLKDVDDDDDDEEDIDDTTIKPTDSVIICARNEDEVSHLEVYVYEESSTGS
PNMYVHHHIVIPEFPLCTAWIDCPLKGGDKGNFVAIGSKDTPTIEIWDLDVRDEVLPCVQ
LGGIEEMKIIKKKKSKKIKKPKYKEGSHTDSVLGLAWNKEIRNILASASADRKVKVWDVA
TGQCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVES
LAWNPHSEHSFVVSLEDGTVKGFDIRAAQSGSDSDLKPSFTIQAHDQDKGVSSISYNTSA
PNLLATGSMDKTVKLWDLSNNEPSCITSHKPKAGAVFSISFSADNPFLLAIGGSKGELHV
WDTLLDANVARKYGSNKS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgataactgcactttcatggatacctaaagggtctctaaaggctgttcctgatgctgct
gagcctccttcaaaggaagaaatcaaagagcttatcgagagtggagctttcgtgggaagt
gtggatggtagtaacgaggatgaagaagagatggaagaagaagaagaagtaggtggagat
cagattagtgaagttgaccgtgccaaggctgtagctgaagcttttggtaaatcttccaat
accaaatcttcttccatggaggttgatgaggtagctgctgcaatgaaagaactcgacatg
gataactatgatgaagaggatgatggaattgaactcttcagctccgggaatggggatctt
ttttatgcaagtaatgagttggatccatatctgaaggatgttgatgatgatgatgatgat
gaagaggatattgatgatacgacaatcaagccaactgattcagtgattatctgcgctagg
aatgaagatgaagtcagccatcttgaggtttatgtgtacgaggagtcatccaccggatca
ccaaacatgtatgttcatcatcacatagttataccggagtttccattgtgcactgcatgg
attgattgtccacttaaaggaggagacaaagggaattttgtagctattggatcaaaggat
actccgacaatagagatatgggatcttgacgttagggacgaggtgctaccttgtgtgcaa
ctgggaggaatagaggagatgaagatcattaagaaaaagaagagtaagaagatcaagaag
ccgaaatacaaagaaggcagccatactgattcagtacttggtcttgcttggaacaaggag
attcggaacatacttgctagtgctagtgcggacagaaaggttaaggtgtgggatgtagct
actggacaatgtaagattactatggagcatcacacaaaggaggttcaagcggttgcttgg
aatcattatgctccagaagtgcttctcagtgggtcctttgatcaaactgttgttttgaaa
gacggaagacaaccttcgcactcgggtttcaaatggtctgtcatgtctgatgtcgaaagc
ttagcctggaatccccacagtgaacactcctttgtggtaagtcttgaggatggaactgtg
aaaggttttgatatacgcgccgcacagtcaggttcagattctgatttaaagccaagcttc
actatccaagcacatgatcaagacaaaggagtctcctccatctcatacaacacttctgca
cccaatcttttggctacggggtctatggataaaacggttaaactttgggatctgtcgaac
aatgagccttcatgcattacttcacacaaaccaaaagctggagctgtattctccatttcc
ttctcagcggacaatcctttcttgcttgctattggtggctcaaagggagagctacatgtc
tgggatacactattggacgctaatgtcgctcgcaaatatgggagcaacaaatcttga
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