Raphanus sativus (radish): 108822391
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Entry
108822391 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108822391
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108822391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108822391
Spliceosome [BR:
rsz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
108822391
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GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
108822391
NCBI-ProteinID:
XP_018450958
UniProt:
A0A6J0KST5
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Position
2:complement(32401223..32404281)
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AA seq
508 aa
AA seq
DB search
MKNEREVKNGGLEEERAAAKRKRVIKDGEEADNNGAAKVEEKNRIGEGQVEELDDDEDDA
SSKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERACSVTLSNLNVYACLVCGKYFQGRS
RKSPAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVEELDR
NKQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPDNYQHCKSPLV
HRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHIDL
RTSKDAISIIHQCFQGELEVVREYQGNENKEVSRMPFLMLGLDLPPPPLFKDVMEKNIIP
QVALFDLLKKFDGETVTEVVRPRLARMRYRVTKSPPYLMFHMVRFKKNNFFKEKNPTLVN
FPVKDMELRDYIPSLPTATEGEKACTKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEM
QDLHVAETLPQMVELSEAYMQIYELQEE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgagagagaagttaagaacggtggtcttgaggaagagagagctgctgcgaag
cggaagagagtgataaaggatggagaggaagcggataataacggagctgcgaaagtagag
gagaagaacagaatcggagaaggtcaagtggaggagctcgatgacgacgaagatgatgcc
tcctccaagggtcggggcaaacattcacgccatgttgaagtccgtagagattgcccttat
cttgatactgttaatcgtcaggtcttggattttgatttcgagagggcttgctcggtgacc
ttgtcgaatttgaatgtgtatgcgtgtctcgtatgcggcaagtacttccaaggaagaagc
aggaagtctcctgcttatacacatagcttggaagctgggcaccacgtttacatcaatctt
ctcaccgagaaggtttattgtcttcctgatagttacgagatcaatgatccttctttggat
gacattcgtcatgttttaaacccaaggtttagtagggcacaagtagaagagcttgatagg
aataagcagtggtctagggctcttgatggctctgactatcttccgggaatggtagggttg
aacaacatacaaaagactgagtttgtgaacgttacaatccaatccttgatgagagttact
cctctacgaaactttttccttattcccgacaactatcagcattgcaagtctcctcttgtt
caccgctttggggaactcactcgaaagatttggcatgctcgaaacttcaaaggacaggta
agtccacatgagttcctgcaagctgtcatgaaagccagtaagaaacgattcaggataggc
cagcagtcagatccagtagagtttatgtcgtggctcctcaacactttgcacatagatctc
cgcacgtcaaaggacgccatcagtatcatccaccagtgcttccagggtgaattagaagtt
gtgagagagtatcaaggtaatgaaaacaaagaagtctccaggatgccttttctgatgctt
ggactagatctgccaccgcctcctcttttcaaagatgtcatggagaaaaacataattcct
caggttgctctattcgatctattgaagaagtttgatggagaaactgtgacagaggtggtt
cgcccaaggctagccagaatgagataccgagtaacgaaatctcctccttacttgatgttc
catatggttcggttcaagaagaacaacttcttcaaggagaagaaccctaccttggttaac
ttcccagtgaaagacatggagctgagggattacataccatcattgcccactgccacagaa
ggggagaaggcttgtacaaagtataacttgatcgccaacattgtacatgacgggaagcca
gaggatgggtatttcagagtgtttgtgcagcggaagtcgcaagaactatggtacgagatg
caggatctgcatgttgcagagacgcttccacagatggtagaactatcggaagcatacatg
cagatatatgagctgcaggaggaatag
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