Raphanus sativus (radish): 108822447
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Entry
108822447 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108822447 isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108822447
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108822447
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
DUF5803
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
108822447
NCBI-ProteinID:
XP_018451027
UniProt:
A0A6J0KT03
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Position
8:6811962..6815541
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AA seq
587 aa
AA seq
DB search
MDLDFDDEPAAPAARAGARFKPKGRPQPKKKQVSVSTSQQTTTLSSDAAKETLSTQSKDA
SSSSTYPSNVSTSETIVIPDGGTISQSTMGTISKENLDEFSGVSVLRACTKVNSEGKRCE
DGTEAAAPACPDDPRRQDSATFGDFVTHETDEVINAETQRMQTGEEGEECHWNMETLDIV
QEEGITSTYEQHTGKFQPKPRLLDTVIEEEPESHYSVDDTMDTANQSEFMVNEESRNTNS
TSHGDHQEEHNIPEVPRETAPGVLEQEHPVVPPSNNDSVMGEGEPQSNEAEPKGKKKRVR
KKKTTTSEEEPEKKKKFKHSSRRQKNRTLEKELLETPDDQIPKLPIKDMIRLVQYREKLE
KKEAKGAPVVPPTQESNTQASEFNNYYSQGFDAEVEDEFGMEEGENQETYVVKPDSPVNY
HSYMNKTPRTRWSKQDTQLFYEGIQQFGSNLLMVQRLFRSPERPKRTHHQIKLKFKLEER
KNPLKLDDALSTRSKDLSLYHNVLKDLEEEAAAKKEGEEEEEEEGEEAGEEAETTTDGPE
NEEPTKTEETERAGDGVTGVKESDGGDECDDNEGDDDDFWNSYKSEM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggatttagacttcgatgatgaacctgctgcacctgcagctagggctggtgcaaggttt
aagccgaaagggagaccacaacccaagaagaagcaagtctctgtctcaacctcacaacag
acaacaacactctcttctgatgctgccaaggagacactctccacacaaagtaaagatgca
tcatcatcatcaacttatcccagcaatgtatcaacttctgagactattgttatccctgat
ggtggaaccattagccaatccaccatgggaactatatctaaagaaaacttagatgaattc
tcaggagtttctgttcttcgtgcttgtactaaggtaaattcggagggaaaaagatgcgag
gatggcacagaggcggcggcacctgcatgtcctgatgaccctagaagacaagattctgca
acgtttggagattttgttactcatgaaacggatgaagttattaatgctgaaactcaaagg
atgcaaacaggggaagaaggagaagaatgtcattggaacatggaaactcttgatattgta
caagaggaaggcatcaccagtacttatgagcaacatactggaaagttccaaccaaagcct
agattgctcgacactgtgattgaagaagaaccagagtctcattactctgttgatgataca
atggatacagctaaccagtctgagtttatggtcaatgaggaatcaagaaacactaattct
acatctcatggagatcatcaagaagaacataatattcctgaagtcccaagagaaacggct
cctggcgtattggaacaagaacatcctgttgtcccacctagtaataacgattctgttatg
ggagaaggagaaccacagtctaatgaagcggaaccaaaggggaaaaagaagagagttcga
aagaagaaaaccactactagtgaagaagaacctgagaagaagaagaagttcaagcattca
agtcgtcggcagaaaaacagaacattggagaaggagttgcttgaaaccccggatgatcaa
atcccaaagctgcctattaaagatatgattcgccttgttcaatacagagaaaagttggag
aaaaaagaagcaaagggagctcctgttgtgccgccgacccaagaaagtaatacacaggca
tcggaatttaacaattattattcacaaggcttcgacgcagaagtggaagacgagtttggt
atggaggagggagaaaatcaagaaacttacgtagttaaaccggactcaccggttaactat
cattcgtacatgaacaagactcccagaactcgatggtcaaaacaagatacacaactcttc
tatgagggaattcaacagtttgggagcaatctattgatggtgcaacgactgtttcggtct
cctgaaagacctaaaagaacgcatcatcaaatcaaactcaaattcaagttggaagaacgc
aagaatccattgaagcttgatgatgctttatcaactcgatcgaaagatctttctctttat
cataatgtgcttaaggaccttgaggaagaagctgcggctaaaaaggaaggagaagaggag
gaagaggaagaaggagaagaagctggagaagaggcagagacaactactgatggtccagag
aatgaggaaccgacgaagactgaggagactgagcgagctggtgatggagtaactggagtt
aaggaatcagacggtggagatgaatgtgacgataacgagggagatgatgatgatttttgg
aattcttataaaagtgaaatgtaa
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