Raphanus sativus (radish): 108822586
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Entry
108822586 CDS
T06014
Name
(RefSeq) RGG repeats nuclear RNA binding protein B
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108822586
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108822586
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Radical_SAM_N
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
108822586
NCBI-ProteinID:
XP_018451204
UniProt:
A0A6J0KVT5
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Position
8:complement(13530795..13532962)
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AA seq
377 aa
AA seq
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MATLNPFDLLDDDTEDPSQLAAAKPLKVEKAAPAQPAKLPTKPLPPSQAVREGKNGPGGG
RGGGGRGGGRGKSGGFNRNGDAPANENGYGGGYRRSEEGDGGRRGGSVGGYRGGRGGGGG
GRRGGYNNGESGDFERPRRNFDRQSGTGHGNEFKRDGAGRGNWGTTEDEIPPVTEESTAV
VEKDVAVEGEATDANKETHVEAQAEEKEPEDKEMTLEEYEKVLEEKRKALQATKVEERKV
DTKAFEAMQQLSSKKSNTDEVFIKLGTEKDKRPVEKEEKTKKSLSINEFLKPANGESYRG
GYRGGRTSRGPREGADRGGRGPREGADRGGRGPRGADRGGRGPRRDNGGGDQKAAAPKFV
APAPKIEDAAQFPTLGK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttgaaccctttcgatctgttggacgatgacacagaggatccaagccagctc
gctgcggctaagccattgaaggtagagaaagctgctccagctcagcctgctaagttgcct
actaagcctcttcctccttctcaagccgtgagggaaggcaagaacggtcctggtggaggt
cgcggtggtggaggccgtggtggtggccgtggtaagagtggtggattcaacaggaacggt
gatgctcctgctaatgaaaacggatacggtggaggctacagacgctcagaagaaggagat
ggagggagacgtggtgggtctgttggtggataccgtggtggtcgtggtggtggtggtggt
ggtcgacgtggaggatacaacaatggagagtctggtgactttgaacgcccacgtaggaac
tttgaccgccagagtggaacaggtcacggaaacgagtttaaacgtgatggagctggccgt
ggcaactggggaaccactgaggatgagatccctccggtgactgaagaatccacagcagtg
gtggagaaggatgtagctgttgaaggtgaagcaactgatgcaaacaaagagacacatgtt
gaagctcaagcagaagagaaagagcctgaggacaaggagatgactctggaggagtatgag
aaagttttggaggagaagaggaaagctctgcaggccaccaaggttgaggagaggaaggtt
gacacaaaagcgtttgaggccatgcaacagctctctagcaaaaagagcaacaccgatgag
gtcttcatcaaactgggaacagagaaggacaagcgcccagttgagaaagaagagaagacc
aagaagtcgttgagcataaacgagtttctgaaacctgccaatggcgagagttacagaggt
ggttaccgtggtggaaggacaagccgtggaccaagagagggagctgacagaggaggtcgt
ggaccaagagaaggagctgacagaggtggtcgtggacccagaggagccgacagaggtggt
cggggaccaagaagagacaacggaggaggagaccagaaggctgctgcacccaaatttgtg
gctcctgcaccaaagattgaagacgccgcacagttccctactctaggaaagtaa
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