Raphanus sativus (radish): 108822599
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Entry
108822599 CDS
T06014
Name
(RefSeq) protein indeterminate-domain 6, chloroplastic isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108822599
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108822599
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
DUF7128
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
108822599
NCBI-ProteinID:
XP_018451217
UniProt:
A0A6J0KVV4
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Position
8:2635941..2639287
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AA seq
470 aa
AA seq
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MSSSYNNSISSSSTQSFLLASAATGANNFNREETAMTMIQQPNSVAPLPPPKKRRNQPGN
PNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSKQEVIRR
KVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKFKCEKCSKRYAVQSDWKAHSKTC
GTKEYRCDCGTIFSRRDSYITHRAFCDALIQESARNPTVSFTAMAAAAGGSGSRPGFYGS
AASALSHNHFGNNSSTSFTPLAAGYNLNRSSTEKFEAFVSQSTNPNPGPTNFLMQCPPNQ
GLMAQNDQTLMNQHGLISLGDNINNNNNNNSLFNLGYFQENTKNSDHTSVPSLFTNADNN
DPSALFRGLTSSSSSSVVVNDFGDSDNGNLQGLMNSLAATTDQQGRPSSSLFDLHFGNNL
SMGGSDRLTLDFLGVSGGNVSSVNGRGGRSGAPLDVDMKFSRPNNPFEKS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcgtacaacaactcaatttcttcatcttccactcagtcttttctcctggcc
agcgccgccaccggagcaaacaactttaaccgtgaagagacggcgatgacgatgattcaa
caacccaactccgttgctccactaccaccacccaagaaacgaagaaaccaacccggaaac
ccaaatccagatgctgaagtgatagcgttatctccaaagacgataatggcgacgaacaga
ttcctatgtgaagtgtgcaacaaagggtttcaaagagaacagaatctacagcttcaccga
agaggacacaaccttccatggaagctgaaacaaaagtctaaacaagaagtgatcaggagg
aaggtgtatctgtgtccagagcccacgtgcgttcaccatgacccttcacgtgctctcgga
gacctcaccggaatcaagaagcattattaccggaagcacggtgagaaaaagtttaaatgt
gagaaatgctctaagcgttacgctgttcaatctgattggaaagctcactctaagacttgt
ggtaccaaagagtatcgctgtgactgtggtaccatcttctctagaagagatagttacatt
acgcatagggcgttctgtgatgcactaatacaggagtcagcaagaaaccctaccgtgagc
ttcacggcaatggcagcagccgctggtggaagtggcagtagacctggattttacggcagt
gctgcgtctgctctctctcacaaccatttcggtaacaactcaagcactagttttacccct
ctagctgcaggttacaatctgaaccgttcatctaccgaaaagtttgaagccttcgtttct
cagtccacaaaccctaatcctggtcctaccaactttctcatgcaatgccctccaaaccaa
ggattgatggcgcagaacgatcagactctcatgaaccagcatggtctcatcagcctaggt
gataacatcaacaacaacaacaacaacaacagcttgttcaacctcggatactttcaagag
aacactaagaactctgatcatacaagtgttccttctcttttcaccaatgccgataacaac
gatccgtctgctttgtttagagggttaacttcttcatcttcttcaagtgtggtcgttaat
gactttggagatagtgataatggaaaccttcaaggtctaatgaactctctagctgcgaca
acagatcagcaaggccggcccagtagcagtcttttcgaccttcattttggaaacaatctt
agcatgggaggctctgataggttgactttggactttcttggcgtcagtggaggaaatgtg
agcagcgtaaatggtcgtggcggacgtagtggagctcctttggacgttgatatgaagttt
tcacgtccaaataatccatttgaaaaatcttga
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