Raphanus sativus (radish): 108822630
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Entry
108822630 CDS
T06014
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04016
MAPK signaling pathway - plant
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108822630
04075 Plant hormone signal transduction
108822630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108822630
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108822630
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Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
108822630
NCBI-ProteinID:
XP_018451259
UniProt:
A0A6J0KVZ3
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Position
8:complement(17128328..17130423)
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AA seq
576 aa
AA seq
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MTDNQLQPMRNLWTTDDNTSMMEAFLTSSDMSALWLQETSATAPAGFNQETLQQRLQALI
EGTNEGWTYAIFWQPSYDFSGDPVLGWGDGYYIGEEDKGKPKQRSTPLPFSTPADQEYRK
KVLRELNSLISGGGGPVDDAVDEEVTDTEWFFLVSMTQSFASGAGLAGKAFSTGNVVWVS
GSDQLSGSSCERAKQGGVFGMQTIACIPSVNGVVELGSTEQIRRSSDLMNKVRLLFNFDV
GTNWNLQGENDPSVWINDPIGASEPGNGQFYSKFENGGSSSTITGNPNHDSTLSPVHSQT
LNPNFNNNFSGEMNFSTSSKPRPGEILSFGNNGKRSSMNPDPIQFENKRKNSLGLIDDKV
LSFGGGGETDHSDLEASVVKETPEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFY
ALRAVVPNVSKMDKASLLGDAIAYINELELNVNKTESEKIKIKNQLEEVKMELAGRKAST
CGDLSSSSSSSSATAPVGMEIEVKVMGWDAMIRVESSKRNHPAARLMSALMDLELEVSHA
SMSVVNDLMIQQATVKMGFRIYTQDQLRASLISKIG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaccagctacaaccaatgaggaatctctggaccaccgacgataacacctct
atgatggaagctttcttgacctcctccgatatgtcagccttatggctacaggaaacgtcg
gcgacagctccggcgggatttaaccaggagactctccagcaaagactacaagcactgatt
gaagggacaaacgaaggttggacctacgctatattctggcagccgtcgtacgatttctca
ggcgaccccgttctcggctggggtgatggttattacataggtgaagaagacaaaggaaag
cccaaacagagatcgactccactgcccttttcgactccggcggatcaggagtatcggaaa
aaagtgttgcgtgagctgaactcgctgatctccggcggaggtggtcctgtggatgatgcc
gtcgatgaggaggtgacggacacggagtggttcttcttggtttcgatgacgcagagcttt
gcatctggtgctgggttggcgggtaaagcgttctcgacaggtaacgtagtttgggtttcc
gggtcggatcagctatccggatcgagttgtgagcgggctaagcaaggaggagtttttggg
atgcagaccatcgcgtgtatcccttcggtcaacggagttgttgagctcgggtcaacggag
cagatccgacggagttctgatcttatgaataaggtccgactgcttttcaatttcgatgtt
ggtactaactggaacctccaaggggaaaacgacccgtctgtatggattaatgatccgatt
ggagcatccgaaccgggtaacggacagttttattccaagtttgaaaatggtggtagttca
agcaccataacgggaaacccgaaccatgattcgactctaagcccggttcactcccaaacc
ctaaatccaaatttcaataacaatttctctggcgaaatgaatttctccacgtcgagtaaa
cccagacccggagagatattgagcttcggtaataatggtaaacggagctccatgaatccc
gatccgatccaattcgagaacaagagaaagaactctctcggtttgatcgacgataaagtt
ctatcattcggaggcggaggagaaaccgatcactccgacctagaagcttccgtagtgaaa
gaaaccccggagaaacgtccgaagaaacgggggagaaaaccggcgaacggtagagaagaa
ccgctgaaccacgtcgaagcggagagacagagacgcgagaaactaaaccagcgtttttac
gcgttacgtgcggttgtaccaaacgtttcgaaaatggacaaagcttccttgctcggagac
gccatcgcttacatcaacgagctcgagttgaatgtaaacaagacggagtccgagaaaatc
aagatcaagaaccagcttgaggaggttaaaatggagctcgccggaagaaaagcaagcacg
tgtggagatctttcatcttcttcttcctcctcttcagctacggcacctgtggggatggag
attgaagtgaaggtaatgggatgggatgcgatgattagggtggaatcgagcaaaaggaat
catccagcggcgagattgatgtcagcgttgatggatttggagctcgaggttagtcatgct
agtatgtcggtggttaacgatttgatgattcagcaagcgaccgtgaagatggggttcaga
atctatacgcaggaccagctccgggcgagtttaatttcaaagatcggttaa
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