Raphanus sativus (radish): 108822675
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Entry
108822675 CDS
T06014
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00500
Starch and sucrose metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108822675
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108822675
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
108822675
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Storage polysaccharide
108822675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Ig_PIFI
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
108822675
NCBI-ProteinID:
XP_018451317
UniProt:
A0A6J0KTU4
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All DBs
Position
8:2024919..2030162
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AA seq
1089 aa
AA seq
DB search
MEVCWQIQTPTSLRPGLQQKGRLKINTFIGFLHRPISSLASLESQYNSNGFLHQITASAD
FSRKKQERMSASGPKSSSPRGFGRRTTVGSAQKRTPKKNDEKDSNATTSTVTNEGIGVSK
LPEAEAVVQKQGSSVLDESNVLDGSDQVDKKPTEDEDVLLEQKLKAERENLRRKEIEALA
EETLARGDRMFVYPLVAKPDEDIEVFLNRTLSSLSNEPDVLIMGAFNDWRWKSFSRRLEK
TELHGDWLSCLLHIPKEAYKMDFVFFNGQSVYDNNYSKDFSVEIKGGMDRVEFENFLLEE
KWREQEKLAKEEAERERQEEEKRRIEARKAAIETDREQAKVETQKRREMLQPALQKAVIS
DENVWYIEPSDFKAGDKVKIYYNKSSGPLGYAKEIWIHGGFNNWVDGLSMVEKLVDDAEL
KADSKKEDWCVAEVIVPVSALVIDWVFADGPPEGAFLYDNNSHQDFHALVPLRTSKELYW
SEEESLMFRKLQEERRLKEEAMRVKMEKTARLKAETKERTLKKFLLSQKDVVYTEPLEIQ
AGRPVTVFYNPSNTVLNGKPEVWFRGSFNRWTHRLGPLPPQKMEAADDGSSHVMTSAKVP
LDAYMMDFVFSEKEDGGVFDNRYGLDYHLPVVGGIAKEPPLHVVHIAVEMAPIAKVGGLG
DVVTSLSRAVQELNHNVDIIFPKYDCIKYNFVKDLQFNRSYHWGETEIKVWHGKVEGVSV
YFLDPQNGLFQRGCVYGCADDAGRFGFFCHAALEFLLQGGFHPDILHCHDWSSAPVSWLF
KDQYTHYGLIKTRVVFTIHNLEFGASAIGKAMTFADKATTVSRTYAKEVAGNSVISPHLY
KFHGIVNGIDPDIWDPYNDNFIPVPYTSENVLEGKRAAKEELQNRLGLKSADLPLVGIIT
RLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSTHGDRARLVLT
YDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGAVPVVRKTGGLYDTVFDVDHDKER
AQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWNRPALEY
IELYHSARK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtgttggcagatacagacaccgacgagtctcagacccggtttacagcaaaag
ggtcggctcaagatcaatacttttattgggtttcttcatcgccccatttctagtcttgct
tcgttggaaagtcaatacaactcaaatgggtttctgcatcagatcacagcaagtgcagat
ttctcaaggaagaagcaagaaagaatgtcagcttcagggcctaaaagttcatctcccaga
ggttttgggagaagaacaacagtaggaagtgctcagaaaagaactccgaagaagaacgat
gaaaaagacagcaatgcaacaacttccacagtaactaatgagggtataggagtcagtaag
ttgcccgaagctgaagctgttgtacagaaacaaggttcttctgttttggatgagagcaat
gtgttagatggaagtgatcaggtggacaagaaaccaaccgaggatgaggatgttttgtta
gaacaaaagctaaaagctgaaagagagaatcttcgtaggaaggagatagaagcgcttgca
gaggaaacattggcaagaggtgatagaatgtttgtgtatcctcttgtggccaaacctgat
gaagacatagaagtgtttctcaacaggactctgtcgtctctgagcaacgaacctgatgtt
ttgatcatgggggcgtttaacgactggagatggaaatctttctcaaggagactggaaaag
acagagctccatggagattggctgtcatgtctcctacacatccccaaagaagcttataag
atggactttgtgtttttcaacggccaaagcgtttatgacaacaattactcaaaagacttc
agtgtagagatcaaaggtgggatggacagagtcgagtttgagaattttcttcttgaagag
aaatggagagagcaagagaagctagctaaggaagaagccgagagagagcggcaagaggaa
gagaagagaagaatcgaagcgagaaaggctgccattgaaactgatagagagcaagcaaag
gtggagacccagaagaggcgtgagatgctacaacctgctcttcagaaagctgttatctca
gatgagaatgtttggtacattgaaccgagtgatttcaaagctggtgataaagtgaagata
tattacaataaaagctctggtcctctaggttatgccaaagagatctggatacatggaggg
tttaataactgggttgatggattatctatggttgaaaagcttgttgatgatgctgagcta
aaggctgattcaaagaaggaagattggtgtgtcgctgaagtcatagttcccgtgagtgct
ttagtcattgactgggtctttgctgatggaccgcctgaaggagcgtttctgtatgacaat
aatagtcaccaagattttcacgcacttgttcctctaagaacttcaaaagagctttactgg
tcagaggaagagagcttgatgtttaggaaacttcaggaggagaggcggttgaaagaggaa
gctatgcgtgtcaagatggagaaaacagctcgcttgaaagcagaaactaaggaaagaaca
ctcaaaaagtttctgctttctcagaaagacgtggtttacacggagcctctagagattcaa
gcggggagacctgtgacagttttctacaatccttcaaacacggttttgaatggaaagcct
gaggtttggtttagaggctcttttaatcgttggactcatcgtttgggtcctttgccacct
cagaaaatggaagcagctgatgatggaagctcgcacgtgatgacttcagctaaggttcca
ttagatgcttacatgatggactttgttttctccgagaaagaagatggtggagtatttgat
aacagatatggcttggattaccacttacctgtagtgggaggtattgccaaggaaccacca
ctacacgttgttcatattgctgttgaaatggcacccattgcaaaggttggaggcttaggc
gatgttgtcactagtctatctcgtgctgttcaagaattaaaccataatgttgatatcatc
ttcccaaagtatgattgcataaagtacaactttgtgaaggacttgcagttcaacagaagc
tatcactggggagaaactgagataaaagtttggcatggaaaagtggaaggcgtttcggtt
tactttttagatccgcagaatggactgttccagagaggatgtgtttacggttgcgcagat
gatgcaggaagatttggtttcttctgtcacgcggctcttgagttccttcttcaaggaggt
tttcatccagacattcttcactgtcacgactggtccagcgctccagtttcgtggctgttc
aaggatcaatacacgcattacggtttgattaaaacacgcgtcgtcttcacaatccataac
ttggaatttggagcaagtgccattggtaaagccatgacgtttgcagacaaagctacaacg
gtttcacgaacatatgccaaggaagttgctggaaactctgtaatctctccacacttatac
aagttccacggaatagtaaatggaatcgatccagacatatgggatccatacaacgataac
ttcattccggtgccttatacttcagagaacgtattagaaggcaaaagagcagccaaggaa
gaactgcaaaacaggcttggactaaagagcgctgatcttcctttagtaggaatcatcaca
cgcttaactcaccagaaaggaatacatttgatcaaacacgctatttggcgtaccttggaa
cgcaatggacaggttgtattgctaggttcagctcctgatcctaggatccaaaatgatttc
gtgaacttggcaaatcagttacattctactcacggtgatcgagctaggcttgttctaacc
tacgacgagcctctttcccacttgatctatgctggggctgactttattcttgtaccgtca
atatttgagccgtgtggactgacacagctcattgccatgagatacggtgctgttcctgtc
gtaagaaaaactggaggactctatgacacggtgtttgatgtggaccatgataaagaaaga
gcacaagctcaagttctagaacctaatggcttcagttttgatggagctgatgctcctggt
gtggactatgctctcaatagggcgatatcggcttggtacgatgggagagagtggtttaac
tcgctgtgtaagacggtgatggagcaagactggtcatggaatcgtcctgcacttgagtac
attgagctctatcactctgcacgcaagtga
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