Raphanus sativus (radish): 108822678
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Entry
108822678 CDS
T06014
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108822678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108822678
03036 Chromosome and associated proteins [BR:
rsz03036
]
108822678
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108822678
Coactivators
SAGA/TFTC/STAGA complex
108822678
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108822678
STAGA complex
108822678
TFTC complex
108822678
SAGA complex
108822678
SLIK complex
108822678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
108822678
NCBI-ProteinID:
XP_018451320
UniProt:
A0A6J0KTR3
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MSIVPKETIEVTAQSIGITNLSPEAALMLAPDVEYRVREIMQEAIKSMRHSKRTTLTASD
VDGALNLRSLEPTYGFASGGPFRFRKAVGHQDLFYTDDREVDFKDVIGAPLPKAPLDTEL
VCHWLAIEGVQPAIPENAPLEVIRAPADNKIYEQKDGPLIDVRPPVKHVLSRELQLYFQK
IAEITMSKSSPALFKEALVSLASDSGLHPLVPYFTNFIADEVSRGLNDFQILFNLMHVVR
SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFTAKLVSLICKRFGNTY
HTLQSRLSKTLGNALLDPKKALTQHYGAIQGLTALGHNVVRLLILSNLEPYLSLLEPELD
CEKQKNQMKSYEAWRVYGALLRAAGLCIHDRLKVFPNLPSPSPSLLHKGKGKIISAETRK
RKLSADSSQNQLPHKRLMTTTDGLRPQDHTGPAPMHVDKPMGKKGNESESRHQNEKERGK
GRVITMKAILGQIWKDDLDSGRLLVKLHQLYDDRILPFIPSTEMSVFL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtacctaaggaaacgattgaggttacagcacagagtattgggatcactaac
ttatcacccgaggctgcacttatgcttgctcctgatgttgagtaccgtgttcgtgagatc
atgcaggaagctatcaagagcatgcgtcactcaaagagaacgactttgacagcttcggat
gttgatggtgctctcaacttaaggagccttgagccgacatatggctttgcatcaggagga
ccgtttcgttttagaaaagctgttgggcatcaggatttgttctacactgatgacagagag
gtggatttcaaagatgtgattggagccccactaccgaaagctccccttgatactgaactt
gtctgtcactggctggctattgaaggagtgcagccagctatcccagaaaatgctccttta
gaagtcatcagagcacctgcagataacaaaatatatgagcaaaaggatggacctctaatt
gacgttaggccaccagttaaacatgtactatctagggaacttcagttatacttccaaaag
attgctgaaattacaatgagcaagtcaagtcctgctctgtttaaagaggcattagtgagc
ttggcctcagactcaggacttcatcctttagttccatattttacaaatttcattgctgat
gaggtatcacgtggtttaaatgacttccaaatcctgtttaatctaatgcacgttgttaga
agtcttctacagaatccccatatacacatagaaccttatctgcaccagttgatgccatct
gttgtaacatgccttgtatcgagaaagcttggaaacagatttgccgataaccattgggag
cttcgagattttacagcgaagctagtttcactgatatgtaaaaggtttggaaacacttac
catacacttcagtctcgtctttcgaaaactctaggcaatgcacttttggacccaaagaaa
gctttgactcagcactatggtgcaattcaaggattaacggctttggggcacaatgttgta
cgccttcttattctgtcaaatctcgaaccgtatctaagtcttctcgaaccagaattggat
tgtgagaagcaaaagaaccaaatgaagagctatgaagcttggcgtgtgtatggggccttg
ctgcgtgctgcaggcttgtgtatacatgatcggcttaaagtcttcccaaatttaccatcc
ccttcgccaagtttactccataagggaaagggaaaaataatcagtgctgagacacgtaag
cggaagctaagtgctgattcttcacaaaaccagttaccccataaaagattgatgacaact
acagatgggttacgaccgcaagatcacaccggtccagctccaatgcatgtagataaaccg
atgggaaagaaaggtaacgaatctgaaagcagacaccaaaatgagaaagaaaggggaaag
ggccgggttattaccatgaaagcaatccttggtcagatttggaaagatgaccttgattct
ggacggctcttggtgaaactgcaccaactctatgatgataggattcttccttttatccct
tctacagaaatgtcagtattcctctaa
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integrated database retrieval system
