Raphanus sativus (radish): 108822735
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Entry
108822735 CDS
T06014
Name
(RefSeq) transcription factor CAULIFLOWER isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108822735
Transcription factors [BR:
rsz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
108822735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
FapA
DUF1192
DUF2115
Motif
Other DBs
NCBI-GeneID:
108822735
NCBI-ProteinID:
XP_018451392
UniProt:
A0A6J0KNK5
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Position
8:4873350..4877333
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AA seq
254 aa
AA seq
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MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVSLIVFSHKGKLFEYSSE
SCMEKVLERYERYSYAEKQLKAPDSHVNAKTNWSMEYSRLKAKIELLERNQRHYLGEDLE
SISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEIQEENSMLAKQIKERESI
LRTHQNQSDQQNRSHHVPPQPQPQLHPYMISHQASPFLNMGGLYQREDPTAVRRNSLDLT
LNPIYNCNLGYFAA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggggtagggttgaaatgaagaggatagagaacaagatcaatagacaagtgaca
ttctcgaaaagaagagctggtcttttaaagaaagcacatgagatctcggttctttgtgat
gctgaggtttcccttattgtcttctcccataaggggaaactgttcgagtactcgtctgaa
tcttgcatggagaaggtactggaacgctacgagaggtactcttacgccgagaaacagcta
aaagctccagactcccacgtcaatgcaaaaacgaactggtcaatggaatatagcaggctt
aaggctaagattgagcttttggagaggaaccaaaggcattatctgggagaagatttagaa
tcaatcagcataaaggagctacagaatctggagcaacagcttgacacttctcttaaacat
attcgctccagaaaaaatcaactaatgcacgagtccctcaaccacctccaaagaaaggag
aaagaaatacaggaggaaaacagcatgcttgccaaacagataaaggaaagggagagtata
ctaaggacacatcaaaaccaatcagaccagcaaaaccgcagccaccatgtaccgcctcag
ccgcaaccgcagttacatccttacatgatctctcatcaggcatctcctttcctaaatatg
ggtggcctgtaccaacgagaagatccaacggcggtgagaaggaacagtctcgatctgact
cttaatcccatttacaactgcaaccttggttactttgccgcatga
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