Raphanus sativus (radish): 108822856
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Entry
108822856 CDS
T06014
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
rsz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108822856
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108822856
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108822856
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108822856
03036 Chromosome and associated proteins [BR:
rsz03036
]
108822856
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108822856
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108822856
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108822856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EF3_N
PDS5
HEAT_EZ
SCD
Adaptin_N
CLASP_N
INTS7_N
TAF6_C
Cnd1
HEAT_DAAF5
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
Cobl
Motif
Other DBs
NCBI-GeneID:
108822856
NCBI-ProteinID:
XP_018451545
UniProt:
A0A6J0KUE9
LinkDB
All DBs
Position
8:complement(5028750..5032273)
Genome browser
AA seq
588 aa
AA seq
DB search
MAMVDEPLYPIALLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD
DEVLLAMAEELGVFIPFVGGIEHAHVLLPPLESLCTVEETSVREKAVDSLCKIGSQMKES
DLVDSFVPLAKRLAAGEWFAARVSACGLFHVAYQGCTDVLKTELRSSYGQLCQDDMPMVR
RAAASNLGKFATTVESTFLNAEIMTMFDGLTKDEQDSVRLLAVEGCAALGKLLEPQECVA
RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCQLLNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWMQDKVYSIREAAANNLKRLAEEFGSEWAMQHIVPQV
LDMVNNPHYLHRMMALRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNIKFNVAKLLQS
LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALRSIDAAAVAQS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtggatgaacccttgtaccccatcgctcttctcatcgacgagctcaaaaac
gatgacatccagctccgtctgaactctatccgccgtttatctacaatcgctcgtgccctc
ggagaggagcgtactaggaaagagctgatcccctttctgagtgagaacagtgacgacgac
gatgaggtcctcctcgccatggctgaggagctgggagttttcatccccttcgtcggtggg
attgagcatgctcatgtgctcctccctcctctcgaatctctctgcaccgtcgaggagaca
tccgtgagagagaaagctgtggactctctttgtaagatcggttctcagatgaaggagagt
gaccttgtcgactcctttgtccctcttgccaagaggcttgcggctggtgagtggtttgcg
gcgagggtttcggcatgtggtttgtttcatgttgcttaccaaggttgtaccgatgtgttg
aagacggagttgcggtctagttatggtcagttgtgccaagatgatatgcctatggtgcgg
agagctgctgcgtctaacctggggaagtttgctacgactgtggagtcgacgtttttgaat
gctgagatcatgactatgttcgatggtcttactaaagatgagcaggattctgttagactt
ttggctgtggaaggctgtgcagctcttggaaagttgttggaacctcaggaatgtgttgca
cgcattttacctgttattgttaatttctctcaggataaatcatggagggtgcgctacatg
gttgctaatcaactatacgaactttgcgaggcagtgggtcctgattgcaccaagacggat
ttggttcctgcatatgtgagattgctacgtgacaatgaggctgaagtgcgaatagcagca
gcgggaaaagtgactaagttctgtcagcttttgaatccagagcttgccatccagcacatc
cttccttgtgtgaaggaattatcatctgattcttctcaacatgtccgctctgctctagct
tcagtaataatgggaatggctcctatccttggcaaggattcaacgattgagcatctgcta
ccaatttttctttcccttttgaaagatgaatttcctgatgtacgcctcaacatcataagc
aagctagaccaagtcaaccaggttattggaattgatctgctatcacagtccttgttgcct
gcgattgttgagcttgctgaggatcggcactggagagtccgacttgctataattgagtat
gttcctctgttggctagccagttaggtatagggttcttcgatgacaagctcggagccctt
tgcatgcaatggatgcaagacaaggtctactctatccgtgaagccgcagcaaacaaccta
aagcgtcttgcagaggagtttggttctgaatgggcaatgcagcacatagttccccaggtg
ttggacatggtcaacaatccgcactacctacataggatgatggctctacgtgcaatctct
ctcatggctcctgtaatgggatcagaaatcacgtgctctaagtttcttcctgtggtggtt
gaggcatccaaagacagagttccaaacatcaagttcaatgttgctaagcttctgcaatcc
ctcatccccatagtcgaccaatcagtggtggacaaaacaatccgtcagtgtttggtggac
ctgagcgaggaccctgatgtcgatgttcgctattttgcaaaccaagcgcttcgttccatt
gatgctgccgcagtggcgcaatcctga
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