Raphanus sativus (radish): 108822879
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Entry
108822879 CDS
T06014
Name
(RefSeq) auxin response factor 19-like
KO
K14486
auxin response factor
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108822879
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
ORF29
RA
Motif
Other DBs
NCBI-GeneID:
108822879
NCBI-ProteinID:
XP_018451575
UniProt:
A0A6J0KT69
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Position
8:complement(3511031..3515915)
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AA seq
1038 aa
AA seq
DB search
MKAPSNGFYPNSIEGEEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQK
QTEFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLN
RQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFR
HIYRGQPKRHLLTSGWSVFVSTKRLFAGDSVLFVSDEKSQLMLGIRRANRQTPTLSSSVI
SSDSMHIGIFAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMV
FETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVIT
PFYICPPPFFRPKYPRQPGMPDDELDMENAFKRGMPWMGEEFGMKDAQSSMFPGLSLVQW
MSMQQNNNNTLSATATQLPSALSSYNLPNSFAPNDPSKLLNFHSPNLSPVNSQFNKPNMV
SHISQQMQAQPAVVKSQQQERQMSHQQLQQGVYNVGGSVNNGVSVVSNQVSCQDQSTGFS
QSQLQQQSMLSNGSAKMNHQNIVRKQGLSQMTSFAQELQFQQQMELHNSSQLPRNQQEQS
STHSLQQSSQPSPSQQLQLQLLQKLQQQQQQQSIPQVSSSLQPQLSVALQQTQSHQLQQL
LSSQNQQPFSASTFVQPPQVQVSHQQQGHMNNKPLVTAGRSHSGHTDREAPSCSTSPSTN
NTGHNNVSPTNFLSRNQQQGQAASVPASDSVFDRASSQVQELYTKTESLVNLKSFSEYKF
KGSVTDQINVSTTGTTYCPDAAGPAQQQQTFPLPSFGSDGDCQPQHTRNNLGNLEAVTPE
ALYSQKDFQNLVNAPRDIETELSSAAISSQSFGIPSIPFKSGGSNEIGGINDSGIMNGGG
LWPNQAQRVRTYTKVQKRGSVGRSIDVTRYSGYEELRNDLARMFGIQGQLEDPRPSDWKL
VYTDHENDILLVGDDPWEEFVNCVQKIKILSSVEVQQMSLDGDLAAIPTTNQVCSETDSG
NAWKVHYDDTSAAASFNR
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccatcaaatggattttatcccaactcaatcgaaggagaggagaagaaacca
atcaattctcagctatggcacgcttgtgcaggccctcttgtttcactgcctcctgtggga
agtcttgttgtttacttccctcaaggacatagcgagcaagttgcagcatctatgcagaaa
caaactgagtttataccaaattacccaaaccttccttctaagctcatttgcttgcttcac
agtgttacactacatgctgatacggagaccgatgaagtctatgcacaaatgactcttcaa
cctgtgaataagtacgacagagaagcattgctagcatctgatatgggtctgaagctaaac
agacaacctactgagtttttctgcaagacacttacagcgagtgacacaagcacacacggt
gggttctctgtaccacgtcgtgcagctgagaaaatcttccctcctcttgatttctcaatg
caaccgcctgctcaagagattgtagctaaagatttacacgacactacatggaccttcaga
catatctatcgaggccaaccaaaacgacacttgctcacctctggttggagcgttttcgtt
agcacaaagagactattcgctggtgattcagttttgtttgtaagtgatgagaaatcacag
ctcatgttgggtataagacgtgcaaacagacaaacaccgactctttcctcatcggtcata
tccagcgacagtatgcacattgggatatttgcagctgcagctcacgccaatgccaatagc
agccctttcacaatcttctttaatccaagagcaagtccttcagagtttgtggttcctcta
gccaaatacaacaaggcgttgtacgctcaagtatctcttggaatgagattccggatggtg
tttgagactgaggattgtggggttcgtaggtatatgggcacagtcaccggtattagtgat
cttgaccctgttagatggaaaggctcccaatggcgtaatcttcaggtaggatgggatgaa
tcaacagctggagatagaccaagcagagtatctatatgggagattgaacctgttataact
cctttttacatatgccctcctccatttttcagaccaaagtacccaaggcaaccagggatg
ccagatgatgagctggacatggaaaacgcattcaaaagaggaatgccttggatgggagaa
gagtttgggatgaaagacgcgcagagttccatgtttcctggtttaagcctggttcagtgg
atgagcatgcagcagaacaacaacaacacattgtcagctactgctactcagctgccatct
gcgctctcgtcttataacctgccaaacagttttgctcccaacgacccttcaaagctgttg
aacttccattctcctaacctctctcccgtgaactcccagttcaacaaaccgaacatggtt
agccatataagtcaacagatgcaagcacaaccagccgtggtgaaatctcaacaacaagag
cgacagatgtcacaccaacagctgcagcaaggggtttataacgtcggaggttctgtaaac
aatggcgtgagtgttgtttctaaccaagtctcttgtcaggatcagtctactggtttttct
cagtctcagcttcagcagcagtcaatgctctctaatggtagtgctaaaatgaaccaccag
aacattgttcggaaacagggtttatctcaaatgacatcgtttgcgcaagaattgcagttt
cagcagcaaatggaattgcataacagtagccaattaccgagaaaccagcaagaacagtcc
tctacgcattcactacaacaatcatcacaaccaagtccctcacagcagcttcagttgcag
ctactgcagaaattgcagcaacagcaacagcaacagtcaatccctcaagtaagctcgtcc
ttacagccacagttatccgtggcgttgcagcagacacaaagccatcaattgcaacaactg
ctttcctctcagaatcaacagcccttctcagcttcaacattcgtgcagcctccacaggtt
caggtgagtcatcagcaacaaggacatatgaacaacaagcctcttgtaaccgctggaaga
tcacattctggtcacacagatagagaagctccttcttgttcgacctcgccttccactaat
aacaccggacataataatgtttcaccaacaaattttctgagtagaaatcaacagcaaggg
caagcagcatctgtacctgcatctgattcagtctttgaccgtgcaagcagtcaagtccaa
gagctttatacaaaaaccgagagcctggtgaatttgaagagtttttctgagtacaagttt
aaaggctcagtaacagatcaaatcaatgtatccacaacaggaacaacgtattgtcctgat
gctgctggccctgcacagcagcaacagactttcccactaccatcattcggttctgatgga
gattgccaacctcaacatacaagaaacaacttaggtaatcttgaagccgtgactcctgaa
gctctctattctcaaaaggacttccagaacttggttaacgcaccaagagacattgaaacc
gagctatcgagtgctgcaataagttctcagtcatttggtattcccagcatccccttcaag
tccggaggttcaaatgagatcggtgggatcaatgattcaggtatcatgaatggtggtgga
ctctggcctaatcaggctcaacgagtgcgaacgtatacaaaggttcaaaaacgaggatcg
gtagggagatcaatagatgttacccgttatagcggctacgaagagctcaggaatgactta
gcaagaatgttcggaatccaaggacagctggaggatccaagaccctctgattggaaactc
gtctacacagatcacgaaaacgatatattgctcgttggtgatgatccatgggaggagttt
gtgaactgcgtgcagaagataaagatcctatcatcagtagaggtgcagcaaatgagctta
gacggagaccttgcagctatcccaaccacaaaccaagtctgcagcgaaacagacagtgga
aatgcttggaaagtgcattatgatgacacttccgctgcagcttcattcaacagatag
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