Raphanus sativus (radish): 108822903
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Entry
108822903 CDS
T06014
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108822903
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
108822903
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
108822903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
108822903
NCBI-ProteinID:
XP_018451608
UniProt:
A0A6J0KVJ4
A0A9W3D757
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MKILSYNVNGLRQRVSQFDSLLKLLDSLDADIICFQETKLRRQELTADLTIAQGYESFFS
CTRTCEKGRTGYSGVATFCRVKSATSSCEAALPVAAEEGFTGLVNGGGKKNDTSCVIAQG
LEEYDKEELLRIDQEGRCIITDHSHFVVFNVYGPRAVADDAERIEFKHRFYDVLERRWEC
LLRQGRRVFVVGDLNIAPFALDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRSKHPD
RRDAFTCWSSSSGAEQFNYGSRIDHILVAGPCLHEEGDQQGHSFLACHVKECDILTEYKR
FKNETIPTRWKGGLGVKLKGSDHVPVFTSFDDLPDIPQHSTPPLASRYLPMIYGFQQTLA
SVLMKRQANEQAKAIEVSCSSSSQSCGEISTGPLRNCSLTGMSPEESCSSEKESTVRVTT
TSGGSTSNLSDRMCVSSVRAEDISRDGNRKKVRRIQSSSRQLSLKSFFTSKSPSNVSSSQ
SSSQGESITEPIVSGKEEDDELTTTSSQEQDQSGSSAKQKNDAALMEWQRIQNLMQNSIP
LCKGHKEACVARVVKKPGPTFGRRFYVCSRAEGPSSNAEANCGYFKWASSKFRDK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattgagttacaacgtgaatggcctcagacaacgagtttctcagttcgattcc
ctcctgaaactcctcgattccttggacgccgatatcatctgcttccaggaaacgaagctg
aggaggcaagaactgacagcggatttaacgatagcccaagggtacgaatccttcttctcg
tgcactcgcacgtgcgagaaaggtcgtactggttactctggtgtagcaacgttctgcagg
gtaaagtcagcaacttcaagctgtgaagctgctttgcctgttgctgctgaagaaggattc
actggtcttgtaaacggaggtgggaagaagaatgatacttcttgtgttattgctcaaggt
cttgaggagtatgacaaagaagagcttcttaggattgaccaagagggtcgttgcattatt
actgatcactcccactttgttgtttttaatgtctatggaccgcgagctgtagctgatgat
gctgagaggattgagtttaagcatcgcttctatgatgttttagagagaaggtgggaatgt
cttttgcgtcaaggaagaagggtatttgttgttggggatctcaacattgctccttttgct
ttggatcgttgtgaagctggccctgatttcgagaaaaacgagttcagaaaatggtttaga
tctctgcttgttgaacgtggtggctccttctctgacgttttcagatctaaacatcctgat
aggagagatgcattcacatgttggtcttcaagtagtggagcagaacaatttaattacggt
tcgagaatcgatcatatcttagttgctggaccatgcttgcatgaagaaggagatcagcag
ggccatagttttttagcttgtcatgtgaaggaatgtgacatattaaccgagtataaacgg
tttaagaatgaaactataccaacaaggtggaaaggtggattgggtgtgaaactaaaggga
tcagaccatgtacctgtattcacaagttttgatgatttgcctgacatcccccaacacagc
acaccgcctttagcttcaagatatcttcccatgatctatggttttcagcaaactcttgcg
tcagtgttaatgaaaagacaagccaatgagcaagccaaagccattgaggtgtcatgttca
tcatcaagtcaaagttgtggagagatctctacaggaccactcagaaactgcagtttgacg
ggtatgtcacctgaggaatcttgctcttcggagaaagaatccactgtgagagtaaccacc
acatctggaggctccactagtaaccttagcgatagaatgtgtgtgtcatctgtgagagct
gaggatatctctagagatggaaacaggaagaaagtgaggaggatccaatcttcttctcga
cagctttctctaaagtcctttttcacttccaaatctccttcaaatgtttcctcaagccag
agctcctcccaaggagagagcatcacagaaccgattgtttccggcaaagaagaagacgat
gaacttactactacttcatcacaggaacaagatcaaagcggttcatcagctaaacagaaa
aacgatgcagcattaatggagtggcaaaggatacagaacctaatgcaaaacagcatacct
ctatgcaaaggacacaaagaagcttgtgtagctcgggttgtaaagaaaccaggtcccaca
tttggacgcagattctacgtatgctctcgagctgagggaccttcctctaatgcagaagca
aactgtggttatttcaaatgggcttcatccaaattccgagacaagtga
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