KEGG   Raphanus sativus (radish): 108822918
Entry
108822918         CDS       T06014                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108822918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108822918
Spliceosome [BR:rsz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108822918
 Complex B
    108822918
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 108822918
NCBI-ProteinID: XP_018451621
UniProt: A0A6J0KVU4
LinkDB
Position
8:7840811..7844524
AA seq 565 aa
MSEFENHEGNGTAVSGGFEADDNVGRGGEIEDQSDSKYQRETRDDERESSRSKDREREKG
SVDRSRDRDADRRSKERSSRDRDVRERHHRSSRHRDRSRERGERRERGSRDRDDDYRRGS
RDRDYDRRRDDRGDRRRHRSRSRSKDRSTRRRSRSRSPSKTKRVSGFDMAPPASAMLAAG
AVTGQVPPPPPTLPPAGMFPNIFPLQTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSA
VANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGI
IFEGAPVKVRRPSDYNPSLAASLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPY
YFTEAQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDK
TLTVRRANQGAMQPKPEQESVLLHAQQQIAFQMNMFQPGPAATTVVCLTQVVAEDELKDD
EEYEDIMEDMRQEGGKFGNLTSVVIPRPSPSGEPVPGLGKVFLKYVDTEGSSRARSGMNG
RKFGGNEVVAVFYPEDKFDQGEYGA
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgtctgaattcgaaaatcacgagggaaacgggacagctgtttccggcggcttcgaggcc
gatgataacgttggccgcggcggcgaaatcgaggaccaatcagactccaaatatcagaga
gaaacacgtgacgatgaaagagagtcgtcaagaagtaaagatagagaaagagagaaggga
tctgttgatcgaagcagagacagagatgctgacagaagaagcaaggagagaagtagtaga
gacagagacgtccgtgagcgtcaccacagaagcagtcgccacagggatcgtagtagagaa
cgcggcgaaagaagagaacgtggtagtagagaccgcgatgatgactaccgcagaggcagc
cgtgaccgtgactatgataggcgtagagatgatagaggagacagacgccgtcataggtct
cgttctcgttccaaggatagatctactaggcgcagatcaaggtctcgatctccatctaaa
accaagcgggtcagtgggttcgatatggcacctccagcctctgcaatgttagctgctggt
gctgttacaggccaagttcctcccccaccacctactcttcctccggctggaatgttcccc
aacatatttcccttacagactgggcaggcatttggtggactccctatgatgccaattcag
gctatgacacagcaggcaactaggcatgctcgcagagtgtacgttggtgggctttccgct
gtggcaaatgaacagtctgtggctacgttctttagtcaagttatggctgctgttggtgga
aacaccgctggtccaggtgatgccgtcgttaatgtttacataaaccacgagaagaagttt
gctttcgtggagatgcgatccgttgaagaggctagtaacgctatgtctttggatgggatc
atattcgagggagctccagtgaaggtgaggagacctagtgactataacccatctctagct
gcatctcttggtccaagccagcccagtccccatctaaacttagctgctgttggtctgact
ccaggtgcttccggcgggctcgaaggtcctgaccgtatcttcgtcggcggacttccgtat
tacttcaccgaggcacaagtcagggagctgctggaaagctttggagccttaaaggggttt
gacctcgtaaaagatagagaaactgggaactccaaaggatacgccttttgtgtgtaccaa
gaagtcgccgttacggatatcgcgtgcgctgctctgaacggtataaagatgggagacaag
actctcaccgtgagacgtgctaaccagggagcaatgcagccgaaacctgaacaagagagt
gtgttgttgcatgcacagcagcagattgcttttcagatgaatatgttccagccgggtcca
gcggcgacaacggttgtgtgtttgactcaagttgttgctgaggatgagcttaaagacgat
gaggagtatgaagatataatggaagacatgagacaagaagggggaaagtttggtaacttg
accagcgttgtgattccgcgtcccagccccagcggtgagccagtgccaggccttggcaag
gtgttcttgaagtatgttgatactgaaggttcgtcgagggcgagaagcgggatgaatggt
aggaagtttggagggaatgaagtggttgctgtgttctatccagaagacaagtttgatcag
ggagagtatggagcctga

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