Raphanus sativus (radish): 108822929
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Entry
108822929 CDS
T06014
Name
(RefSeq) ABC transporter E family member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108822929
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
108822929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_16
SMC_N
AAA
AAA_22
Rad17
AAA_29
AAA_14
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
108822929
NCBI-ProteinID:
XP_018451635
UniProt:
A0A6J0KUQ0
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MGDLIAITDHNLFDERNKAKQSAKPIVGEFNKSRIHSYGPNSFKLHRLPVPVRGDIVGLV
GPRSIGKTTALKILAGELTPNLGRFNDPPLDWLTIRTHLHDKHLRRFLAQVVNHKLKVVF
KPQQVPQDYMGLAVGEILRKVDDRKDLRALILCFLDLKTPSVKFHHLDIRAQHRVTLAAA
LLQDADVYIFDDISSFLDMRQRFMVAQLIRSLKTAKSYVIVVDNDLSVIDYVSDYMYIMY
GEPEAYGVFSEQYFDVETGIEFYLRGFDPIEDNLIRGDPLIFERDFFISAPNEKHLEPDP
EPLIGRRYSYPHMTTNHLKLKMKVEGGNLHDCQIHLVLGDQGTGKSTFIKLLAGFLPPDG
VEPWCPEYLKSYKPKKISFIRACTVRAALETRCFHHRFVSDVIEPLQIDRLMGRKLTSLS
PGERQRVAITFCLMKDAHVYLIDEPSLDLDSDMRIRVALAIRKHILRIQRAAVVVENDFL
MAAYLADKVILVEPSIDTASCLPRDIARPVSGFSVSAGRVNRRPVSDFSVSAGLRPLVNG
PSVSGFSVSSPCDRVAGFNLLLEKLNITFRQVPDSSRLTPRVNKAGSMEDKTQKLNGNFY
YNLA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggagatctcatcgctatcacagatcataatcttttcgatgaaagaaacaaagcgaaa
caatcagctaagccgattgtcggtgaatttaataaaagcagaatccactcctatgggcca
aactcgtttaaattgcacaggcttccagttcctgtacgtggagatattgtaggattggtc
ggacctcgcagtattggaaaaactactgctctcaaaatcttggccggggaactcacaccc
aatctcggccgcttcaatgatcctcctcttgattggctaacaattcggactcacttgcat
gataaacatcttagaagattcttggcccaggttgtaaaccataaactcaaggtcgtgttt
aagccccaacaagtcccacaagactatatggggcttgctgtcggggagattcttcgtaaa
gtcgacgacagaaaagatttaagggctcttatactttgttttctcgacttgaagaccccg
tctgtgaagttccaccatttagatataagagcgcagcacagggttactctcgctgcagct
ctcttgcaggacgctgatgtgtacatatttgacgacatatctagtttccttgatatgcgt
cagaggttcatggttgcccaactcatacgctctctcaaaaccgctaaaagctacgtgatt
gttgtggacaatgaccttagtgtcatcgactatgtttcggattacatgtacattatgtat
ggggaacctgaagcatatggtgtctttagtgagcagtactttgatgtcgaaacaggaatt
gaattttacttgcgtgggtttgatcccatagaagacaaccttatcaggggtgaccccctc
atcttcgagagggattttttcatttctgctcccaatgaaaagcacctcgagcccgacccc
gaacctttgatcggtagaagatactcttatcctcacatgactacaaatcatctgaaactc
aagatgaaagtggaaggagggaatttacacgactgtcagattcacctagtgctgggagac
cagggtacagggaagagcactttcataaaattgctggctggttttctgccaccagatggt
gtagaaccgtggtgcccagaatatttgaaatcatacaaaccgaaaaaaatttcgtttatc
agagcctgtacagtcagggcagcgctagaaacgcgatgttttcaccatcggtttgtatca
gatgtgattgagccacttcagattgaccggttgatgggtcggaaattgacctcactctcg
cctggagaaaggcagagagttgccataactttctgtctgatgaaggacgcgcatgtgtat
ctgatcgatgagccaagcttggatctggactcggatatgcgtatcagagtcgcattagct
ataaggaagcacattctacgcatacagagagccgctgttgttgtggagaatgattttttg
atggctgcttatttagcagacaaagtaattttggttgaaccatccatagatactgcttct
tgtctccctcgtgatatcgcacgtccagtttccggcttttctgtttctgctggtcgtgtt
aaccgacgtccagtttccgacttttctgtttctgctggtctgcgcccacttgttaacgga
ccttcagtttccggcttttctgtttcttctccatgcgaccgtgttgctgggttcaacctt
ttgctggagaaactgaatatcacattcagacaggttccggacagctccagattaacacca
agggtcaacaaagcagggtccatggaggacaagacccagaaacttaatggcaacttctac
tacaatctggcttga
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