KEGG   Raphanus sativus (radish): 108822957
Entry
108822957         CDS       T06014                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108822957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108822957
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108822957
Spliceosome [BR:rsz03041]
 Complex B
  Other components
   Prp19 complex
    108822957
 Complex C
   Prp19-CDC5 complex
    108822957
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    108822957
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 108822957
NCBI-ProteinID: XP_018451675
UniProt: A0A6J0KUU0
LinkDB
Position
Unknown
AA seq 848 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLLPTQWRTIAPIVGRTPSQCLERYEKLLDAACTKDENYEAADDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIGGRHKNRKRKGIDYNAEIPFEKRAPAGFYDTGEEDRPADQVKFPT
TIEELEGKRRADVEAQLRRQDVARNKINERKDAPAAILQANKLNDPEAVRKRSKLMLPPP
QISDHELEEIAKMGYASDLLAENEELTEGSAATRALLANYSQTPRQGMTPMRTPQRTPAG
KGDAIMMEAENLARLRDSQTPLLGGENPELHPSDFTGVTPRKKEIQTPNLMLTPSMTPSM
TPGAAGLTPRIGLTPSRDGSSFAMTPRGTPFRDELHINEDMDMHESAKLERQRREEARRS
LRSGLTGIPQPRNEYHIVAQPPPEESEEPEEKIEEDMSDKIAREKAEEEARHQTLLRKRS
KVLQRDLPRPPAASLELIRSSLLSASGDKSSVVPPTPEEVADELVRKELLQLLEHDNAKY
PLDEKTEKKKGVKNRANSSGSQVTAIEDFEENELEEADKMVKKEAQFLCVAMGNENKTLD
DFVKAHDDCVKDVMYFPTRNAYGPSSVAVKAEKVAALQAEMENARKKMEEDEKKAEHMKA
KYKTYTKGHEKRAETVWSQIEASLKQIEIGGTEVECFKALKRQEEMAASFRKKNLEEEVV
KQKETERKLQARYGELLSTLEKAEEIMVGLRAQALKQADVEDSSHNLKEAKLATGDEEDV
AISTEASV
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgaggattatgatcaagggaggtgtgtggaagaacaccgaagatgagatcctcaaagcc
gccgtgatgaagtacggcaagaaccaatgggctcggatctcgtctctcctcgttcgcaag
tccgccaaacagtgtaaagctcgttggtacgaatggctcgatccctctatcaaaaagact
gaatggaccagagaagaagatgagaagcttctacatcttgcaaagcttctacctactcag
tggagaaccatcgctcccatcgtggggcgtacaccgtctcagtgccttgagaggtatgag
aagcttctcgacgcagcgtgcactaaggacgagaattacgaagcagcggatgatccacgg
aagctgcgtcccggtgagatcgatcccaaccctgaatcgaagcctgctcgtcctgatccg
gtggatatggacgaagacgagaaggaaatgctctctgaagcgagggcgagattggctaac
actagggggaagaaggctaagaggaaagctagagagaagcaactcgaggaagcgaggagg
cttgcttctctgcagaagaggagagagttgaaggcggctgggattggtggaaggcataag
aataggaagcggaaagggattgattataatgcggagattccgtttgagaagagagcgcct
gcggggttttacgacactggtgaagaagatcggcctgctgatcaagtgaagtttccgaca
actattgaggagcttgaagggaaaagaagagctgatgtggaggcgcagttgcgcagacaa
gatgttgcgaggaacaagattaacgagaggaaggatgctccagcagctatattgcaagcg
aacaagctgaatgatccggaagctgttaggaagaggtcaaagctgatgttaccaccaccg
cagatttcagatcacgagttggaggaaattgcaaagatggggtacgcaagtgaccttctt
gcggagaatgaggagctgacagaaggcagtgctgctactcgtgcgcttttggcaaactac
tcgcaaacaccaaggcaggggatgacacccatgaggacgccgcaaagaactcctgctggt
aaaggtgatgctattatgatggaagcagaaaatctggctagattgagagattctcagacg
cctttgctaggaggagaaaatcctgagttgcacccttctgactttactggggttactcct
aggaagaaagagattcaaacgcctaatctgatgctgactccttcaatgactccttcgatg
actcctggtgctgctggccttactcccagaattggcttgacgccatcaagggatgggtct
tcttttgctatgacacccagaggtactccgttcagggatgaacttcacattaatgaagac
atggacatgcacgagagcgctaaacttgagaggcagagacgagaggaagctagaaggagc
ttacgctctggacttactgggattcctcagccaaggaacgagtaccatatagttgcacaa
cctcctccagaagaaagtgaagagccagaagagaaaattgaggaagacatgtcggacaag
atagctagggaaaaggctgaggaggaagcaagacatcagactctgcttaggaaaaggtcc
aaggtgttgcagagagatcttcctagacctccagcagcttcgttggaactaattaggagt
tcattgctttcagccagcggagacaaaagttccgtcgttcctcctactccagaagaggtt
gcagatgaattggtaaggaaggagcttctacagttgctggagcatgataatgcaaagtat
cctcttgatgagaaaactgagaaaaagaagggagttaaaaaccgtgctaatagttctggt
tctcaagtgactgcaattgaagactttgaggaaaatgaactcgaagaggctgacaaaatg
gtaaagaaagaggcgcagtttctttgcgtggcaatgggaaacgagaacaagacccttgac
gatttcgtaaaagctcacgacgattgcgtgaaggatgtcatgtacttccccactcgaaat
gcttacgggccctcgagtgttgctgtgaaggcagagaaagttgcggctttgcaagccgag
atggagaatgcgagaaaaaagatggaggaggatgagaagaaggcagaacacatgaaggcc
aagtataaaacttatacaaagggtcatgagaaaagggcagagaccgtgtggagccaaata
gaggcgagtctgaagcagattgagattggtggaacagaagtagagtgctttaaagcactg
aagaggcaagaagagatggctgcatctttcagaaagaagaatctggaggaagaagtggta
aagcaaaaggagacagagcggaaactgcaagcgcgctatggggaactgttgtcaacgctt
gaaaaagcagaagagataatggtcgggctcagagcacaagcattgaaacaagcggacgtt
gaagattcttctcacaatctaaaagaagccaagctagccactggagacgaagaggacgta
gccatatccacggaagcttctgtctaa

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