Raphanus sativus (radish): 108822980
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Entry
108822980 CDS
T06014
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X1
KO
K03243
translation initiation factor 5B
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rsz03012
]
108822980
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-5
108822980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
108822980
NCBI-ProteinID:
XP_056848629
UniProt:
A0A9W3CAQ9
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All DBs
Position
8:complement(3976793..3983233)
Genome browser
AA seq
1041 aa
AA seq
DB search
MDRENTSACGGDENHPFALSSKGSENPNKVVITGKKKKGKKVCKPHKEEKDDHEIAFSGE
DKLKSKNVGFASFDLLGVEDDDISAEVCDELILGRQVTEETNTKSEDAGGTSRSKKKKNK
SGKTAHEEEDLDKILAELGITPVSPAQPELVAPADGSKDEGEEETVLSVSAKKRKKKKDK
DKDKKVSASSMEEAKEEPSQHQKKVPKHVLEMQEMVARRKEAEEMKKKEEEEKFRKEEEE
RRMQEEREREAEKIKQKRKMRAKEKLQKKKQEGGILTEKQKRDKAFKNKILSDAGMLLAS
DKNSDSSKRPVYGNKRKPARGKANDSASEVVPTLHEGDSTELDKKQEAGDEEDDWEAKSD
DSVDIMGDYDDDGEDVPWLVVKKEIKETASKAHCSGFNAGPVTDTLALKAGVSCRPQKSI
PNVDDATRRPKDANVSVVNEVVEESLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGG
ITQQIGATYFPAENIRERTKELKPDAKLKVPGLLVIDTPGHESFSNLRSRGSNLCDIAIL
VVDIMHGLEPQTIESLNLLRKRNTKFIVALNKVDRLYGWKTSKNAPIEKALALQSKDVVI
EFNMRLTHVITQFKEQGLNTEIYYKNREMGDTISIVPTSAISGEGIPDLLLYLVMWSQKT
MVEKLTFVDKVQCTVLEVKVIAGHGTTIDVVLVNGVLHEGDQIVACGSQGPIITTVRSLL
TPHPMKELRVKGTYLHHRVVKAAQCIKITAQGLEHAVAGTSLHVIGPDVDVEEAKKTAME
DMKSIMSWVDKSGEGVYVQASTLGSLEALLEFLKSPDVKIPVSGIGLGPVHKKDIMKAGV
MLEKKKEYATILAFDVKITTEARELADNMGVKIFCADIIYHLFDQFKGYVKDVRDEERKE
TASEVVFPCVLKILPDHVFKRGDPIILGIEVIDGILKVGTPMCFLKEIEKSRVFVDLGRV
ASIHKDKKPLDDAKKGQQVAIKIIASNPGEEKTFGEDFGIEDELVSHISRRSIDILKTLY
RNELKDELKLVKKLKTLFKIQ
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggagaacacgagcgcgtgtggtggtgacgaaaatcacccctttgccttgtcc
tccaagggaagtgaaaaccctaataaagttgtgatcactggaaagaagaagaagggaaag
aaagtttgtaaaccgcataaggaggagaaggatgatcacgagattgctttttccggggaa
gataagttgaaatctaagaatgtggggtttgcaagctttgatctgcttggtgtagaggat
gatgatattagtgctgaagtatgtgatgagctaatacttgggagacaagttaccgaagaa
actaatactaagagtgaggatgctggaggaacctctaggagtaagaaaaagaaaaataag
agtggaaagactgcacatgaagaagaggatttggacaagattcttgcagaactcgggatc
actcctgtttcaccagcacaacctgagctagttgcacctgcagatggctcaaaggatgaa
ggagaagaagagacagtcctgtcagtttcagcgaagaaaaggaaaaagaagaaggataag
gacaaggacaagaaagtatctgcttcttctatggaggaggctaaggaggagccatcacag
caccagaagaaagttcctaaacacgttctagagatgcaagagatggttgcgcggagaaag
gaagcagaggagatgaagaagaaggaagaggaagagaagtttaggaaagaggaagaggag
cgacgcatgcaggaagagcgagaaagagaagccgaaaagattaaacagaagagaaagatg
agggctaaggagaagctgcagaagaagaagcaagagggagggattctaacagaaaagcag
aagagggacaaggctttcaagaacaagatattgtctgatgctggtatgcttcttgcttca
gataagaacagtgattcctcaaagcgtcctgtttatggcaacaaaagaaaaccagctcgc
ggaaaagcaaacgactctgcttcagaagtagtacctactttgcatgaaggagattcaact
gagctggataagaaacaagaagctggtgatgaggaggatgattgggaagcaaaaagtgat
gattctgttgatataatgggtgattatgatgatgatggtgaagatgtaccttggcttgtg
gttaagaaagagatcaaagaaactgcttcaaaggcccattgttcaggtttcaatgcaggt
cctgtcactgatacactagcattgaaggctggagtttcatgcaggccacaaaaatctata
cctaatgtggatgatgctactaggcggccaaaagatgctaatgtctcagtagttaatgaa
gttgttgaagaaagtcttcgctctcccatttgctgcatcatgggccatgttgatactggc
aaaaccaagctcttggactgcatcagaggaacaaatgttcaggaaggagaagcgggaggt
atcactcagcagattggtgcaacctatttccctgcagaaaacatccgtgagaggaccaag
gagttaaaacccgacgcaaaactcaaggtgccaggtctgttggttattgatacacctgga
cacgagtcattctcgaatctgaggtcaaggggttcaaacctgtgcgacattgcaattcta
gtggtggacataatgcatggtctagagccacaaaccatagagtctcttaatctgttgaga
aagaggaacacaaagttcattgttgccttgaataaggttgataggctatatgggtggaaa
acaagcaagaacgctcctatagagaaggctttggcgctgcaatcgaaagatgtggttatt
gaatttaacatgaggctcactcatgttataacccagttcaaagaacaaggactcaacact
gagatttattacaagaacagagaaatgggagatactatcagtattgtgcctactagtgct
attagtggggaagggattccagatctgctgctatatttggttatgtggtctcagaagaca
atggttgagaaacttacatttgttgacaaagtgcagtgtaccgtccttgaggtcaaagtt
attgcaggccatggtacaacaattgatgttgttttggtcaatggtgtactccatgaaggt
gaccaaatcgttgcttgtgggtcacagggaccaattataacaactgttagatcattattg
actcctcatcctatgaaagagctacgtgtgaagggtacatatctgcatcatagagtagta
aaggctgcgcaatgtatcaagattactgcacagggacttgaacacgccgttgctggtact
tccttacatgtgattggacctgatgtggacgtggaagaagccaagaaaacagccatggag
gatatgaagtcaatcatgagctgggttgacaaaagcggtgaaggagtttacgtacaagct
tcaacactaggatctctggaagcattactagagttcttgaagtctccagatgtgaaaata
cccgtcagtggtattggcctaggacctgtgcataagaaggatatcatgaaggccggagta
atgctagagaagaagaaagagtacgcaacgattcttgcttttgacgtgaagataactaca
gaggctcgcgaactagctgacaacatgggagtcaagatcttctgcgctgatattatctat
catctgttcgatcagtttaaaggttatgtcaaggatgtcagagatgaagaaaggaaggaa
acagcatccgaagtagtgtttccatgtgtacttaagattttaccagaccatgtcttcaaa
agaggagacccaatcatccttggaatcgaggtcatcgatggtatactcaaggttggaact
cccatgtgctttctaaaagagattgagaagtcgagagtgtttgttgatcttggtcgcgtt
gcatctattcataaagacaagaagccacttgacgatgctaagaaaggccagcaggttgcc
atcaagatcattgcctctaaccctggagaagagaaaacgtttggagaggactttggtata
gaagacgagcttgtcagtcatatatctaggagatccatcgacatactcaaaacactctac
aggaatgagttgaaggacgagttgaagcttgttaagaaacttaaaacgctgttcaagata
caataa
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