KEGG   Raphanus sativus (radish): 108822992
Entry
108822992         CDS       T06014                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1b
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108822992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108822992
   03036 Chromosome and associated proteins [BR:rsz03036]
    108822992
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108822992
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108822992
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     108822992
    Noncanonical PRC1 (PRC1.1)
     108822992
    Noncanonical PRC1 (PRC1.3/1.5)
     108822992
    Noncanonical PRC1 (PRC1.6)
     108822992
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-RING_6 zf-C3HC4_4 zf-RING_4 zf-RING_11
Other DBs
NCBI-GeneID: 108822992
NCBI-ProteinID: XP_018451714
UniProt: A0A6J0KX80
LinkDB
Position
Unknown
AA seq 332 aa
MPALNNVSAAEKEDEQLGRSTTQGEEKEEDPDRMDVVMDEEEEEDSQERIKSLTSEEQSE
SEFVESVELEDIRKYVQCPICLGIIRKTRTVMGCLHRFCQECIDKSMRFGNHECPACRKH
CASRRSLRPDPKFDAFIAATFGNIDSNEEQDLAFDEDEFARNKQIQASIAQVSLRQSEAL
VKRKSLDAPGVLPRSQPSGTGSRRRRRNCRNMEQDDDDGDSNRGKGSSSAEPSAEILPRK
RKRRSAPRPTAHPSSLCPDNNDNCANNVTEEAHHRDIRGTLSHGLGWGRGGRRSNARQGN
NNQVASSSSKSVRNARLNRLVEYLGRLESNSV
NT seq 999 nt   +upstreamnt  +downstreamnt
atgcctgctctgaacaacgtttccgccgccgagaaagaagacgagcaacttggtcgtagt
accacacaaggtgaggagaaagaagaagatccagaccgcatggatgtggtgatggacgaa
gaagaagaagaagattcccaggagagaatcaaatctcttacatcagaagagcaatcagaa
tcagaatttgtggaaagtgttgagctagaggatatccgtaagtacgtgcagtgtccgata
tgtttaggaattataaggaaaacaaggactgtcatgggatgtctccatcggttttgtcaa
gaatgcattgataagtcaatgagatttgggaaccatgagtgtcctgcttgtagaaaacat
tgtgctagcagacgttcgttaagaccagacccaaaattcgatgcttttattgcagctaca
ttcggaaatatcgatagtaatgaggagcaggatttagcttttgatgaagatgaattcgct
cgtaataagcagattcaagcatctatagctcaagtatcgctacgacaatctgaggccctt
gtgaaaagaaagtctttagatgcaccaggggtcttaccaagatcacagcctagtggtact
ggctccagaaggaggaggaggaactgcagaaacatggaacaggatgatgatgatggtgat
agcaacagaggcaaaggttcttcttcagctgagccttctgcagaaatactgccgagaaaa
cgaaaaagacgttctgcacctcgtcctacagctcacccttcttctttatgtccagacaac
aatgataactgcgctaataatgtaacagaggaggcgcatcatagagacatcagaggaaca
ttatcacatgggcttggatggggaagaggcggcagaaggagtaacgcaaggcaaggaaat
aataaccaagtagctagtagtagtagcaagagtgtcaggaatgctcgcttgaacagactt
gtggagtatcttggtagattagagagtaacagtgtctag

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