Raphanus sativus (radish): 108823037
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Entry
108823037 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108823037
04121 Ubiquitin system [BR:
rsz04121
]
108823037
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108823037
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108823037
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108823037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-HC5HC2H
zf-Di19
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
108823037
NCBI-ProteinID:
XP_018451766
UniProt:
A0A6J0KW97
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MEEEGIATRRTYWCHMCSRTVDPLMEAEIKCPFCASGFVEEMSDEEEHDDHRANSTSLWA
PILMQLMNNPNQTTAEDNQNHVAEAEAETENEAAGNDVDSQLQEILRRRRGRSSVSVIRL
SLRGVGGAGSTLEPDDNNNNNNNNGDGGGGGDRERGRLIMVDGGSLSEYFIGPGFEALLQ
RLADNDPNRYGTPPALKEAVESLSTVKIQEEDTLQCSVCLDDFEIGMEVKEMPCKHKFHG
DCLLPWLELHCSCPVCRYELPSDETKTESARTEEPNGNDGGSVSSSSTSSQGSGNSHPTE
QGEEEEEESDDGDGIELSIPWLFSSLFSSSQGSSNPSTDTN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaggaatcgcaacgaggaggacgtactggtgccacatgtgctctcgaaca
gtggatccacttatggaagctgagatcaaatgccccttttgtgcaagtggctttgttgaa
gagatgtccgacgaagaggaacatgatgatcacagagcaaacagcacctctctctgggct
cccatcttgatgcaactcatgaataatcctaaccagactactgctgaagataatcaaaac
cacgtggcagaggcagaggcagagaccgagaacgaagctgctggaaacgatgtggattct
cagctccaagagatcctcaggagaagaagaggaagaagttctgtttccgtcatacgacta
tctcttcgtggagtaggaggagcagggtcgacacttgaacctgatgacaacaacaacaac
aacaacaacaacggagatggtggtggtggtggtgatagagagagaggacgcttgatcatg
gtggatggtggttctctgagtgagtatttcatcggtcctggattcgaagcccttcttcag
cgtttagctgacaacgatcccaacagatacggaacacctccagctctcaaagaagctgtt
gagtctttgtctactgtcaaaatccaagaggaggatactctgcagtgttcggtttgtttg
gacgattttgagattgggatggaagtgaaagagatgccttgtaagcacaagttccacggt
gactgtttactcccgtggcttgagcttcattgttcgtgtccggtttgtaggtatgagtta
ccttcggatgagacaaagacggagtctgcaagaactgaagaaccaaatggtaacgatggt
ggaagtgtgtcttcttcttctacgagcagccaaggaagtgggaacagtcaccctactgag
caaggagaagaagaagaggaggagagcgatgatggtgatgggattgaattatcaatcccg
tggctgtttagcagcttgttctcgtcgtcccaaggcagcagcaacccatcgactgataca
aactga
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integrated database retrieval system
