Raphanus sativus (radish): 108823087
Help
Entry
108823087 CDS
T06014
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108823087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108823087
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108823087
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108823087
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108823087
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108823087
Messenger RNA biogenesis [BR:
rsz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108823087
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP60 / Chaperonin
108823087
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108823087
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108823087
Exosomal proteins of other body fluids (saliva and urine)
108823087
Exosomal proteins of breast cancer cells
108823087
Exosomal proteins of colorectal cancer cells
108823087
Exosomal proteins of bladder cancer cells
108823087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
108823087
NCBI-ProteinID:
XP_056855042
UniProt:
A0A9W3CU11
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNGHKADKKLMNKLSSSSFGRRQSVFPRLRRSTPAIVCAAKELH
FNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVAELKKMSKEVEDSELADVAAVSAGNNAEIGSMIAEAMSRVGRKGVVTLEEGKSAENA
LYVVEGMQFDRGYVSPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGHAAKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKAGLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKYGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaactttcaccgcgacgtcttccattggttccatggttgctccaaatgggcac
aaagcggataagaagctcatgaacaagctgtcttcaagctctttcgggaggaggcagagc
gtgttccccaggctcagaagatccactcctgctattgtatgcgcagccaaggagttgcat
ttcaacaaagacgggactaccatcaggaagcttcaagctggtgtcaacaagcttgcagac
ctagttggtgttacacttggacctaaggggagaaatgttgttcttgagagcaagtatgga
tcacctagaattgttaatgatggtgtcactgttgctagggaggttgaactggaagacccg
gttgagaacattggtgctaagcttgtgaggcaagcagctgccaagaccaatgacttggcc
ggtgatggtaccacaacatctgtggttcttgcacaaggttttattgctgagggtgtcaag
gtggtggctgctggtgcaaaccctgtattgatcactagaggcattgagaagacagcaaag
gctttggttgccgagctcaagaaaatgtctaaggaggttgaagacagtgagcttgcagat
gtagcagcggttagtgcgggtaacaatgcagaaatcggaagtatgattgctgaagcaatg
agcagagttggcaggaagggtgtggtgacacttgaggagggtaaaagtgctgagaacgct
ctctacgttgtggagggaatgcaatttgatcgcggttacgtctccccttactttgtgaca
gacagtgagaaaatgtcggttgagttcgacaattgcaagttgcttcttgttgacaagaag
attaccaatgcaagggatcttgttggtgttttggaggatgcaattagaggaggatacccg
attttaataattgcagaagacattgagcaggaggctttagcgacccttgttgttaacaag
cttagaggcacactgaagattgcagctctcaaggctccaggatttggagagcgcaagagc
caataccttgacgatattgccatcctcactggagcaactgtgattcgtgaggaagttggt
ctttcacttgacaaagctggaaaagaggttcttggacatgccgcaaaggtggtcctcact
aaggagacttcgaccattgtgggtgatgggagcacacaggacgcagtgcaaaagcgtgtt
acacaaattaagaaccttattgagcaagcagagcaagattatgagaaggaaaaactgaat
gagagaattgcaaagctctctggtggagttgctgtgattcaggtcggagcacaaacggaa
acagaactcaaagagaagaaattgagagttgaagatgctcttaatgctacaaaggctgct
gttgaggaaggtattgtcgttggtggtggctgtactctgcttcgtcttgcttccaaggtt
gatgccattaaagctggtctcgacaatgatgaagaaaaggttggagcggatatcgtgaaa
agagcactgagttaccctctgaaactgattgccaagaacgccggagtcaatggaagcgta
gttagcgagaaggtgctttctaacgataatgtgaagtacggttacaatgctgcaaccggc
aagtacgaggatctaatggctgcaggaatcatcgatccaactaaggttgtgagatgttgc
ttggaacacgcagcttcggttgcaaagacattcttgatgtctgactgtgtcgttgttgag
atcaaggagcctgagccagttcctgtaggcaacccaatggacaactcaggttatggatac
tga
DBGET
integrated database retrieval system
