Raphanus sativus (radish): 108823415
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Entry
108823415 CDS
T06014
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108823415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108823415
Membrane trafficking [BR:
rsz04131
]
SNARE
SNAP-25[C] (Qc)
STX8
108823415
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Motif
Pfam:
SNARE
Laminin_II
Sarcoglycan_1
STX6_10_61_N
DUF16
SlyX
Motif
Other DBs
NCBI-GeneID:
108823415
NCBI-ProteinID:
XP_018452113
UniProt:
A0A6J0KWZ8
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All DBs
Position
9:complement(817186..819260)
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AA seq
230 aa
AA seq
DB search
MGSSSDAWMREYNEALKLSEDINGMMSERNSSGVTGPDAQRRASAIRRKITILGTRLDTL
QSLLVGKQHVSEKEVNRRKDMVGNLRSKANQVASALNMSNFANRDSLLGPDTKPDDAMNR
VSGMDNQGIVGFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIEDLDYHVD
VTDSRLRRVQKSLAVMNKNMKGGCSCMSMLLSVLGIVGLALVIWLLVKYL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggggtcttcttctgatgcatggatgagagagtacaatgaggctttaaagctctctgag
gatatcaatggcatgatgtctgaaaggaactcgtctggtgtaacggggcctgatgctcag
cgtcgtgcttctgctattcgaagaaagatcaccattttggggactcgattagacactctt
caatcccttcttgttgggaagcaacatgtgtcagagaaggaggtgaatcgtcgcaaggat
atggttgggaacttgagatcaaaggcgaaccaggtggcgtctgctttgaacatgtcaaac
tttgcgaatagagacagcttgcttgggccagatacaaagcctgatgatgcaatgaacaga
gtctctggcatggacaaccaaggcattgttggatttcaaagacaagttatgagagaacaa
gacgaagggctggagaagttggaggaaacagtgatgagtaccaaacacattgctctcgct
gtcaatgaagagctcactctgcagacaaggcttattgaagacttggactaccacgtggat
gttactgactcccgcttacggcgggtgcagaagagcctagcggtgatgaacaagaatatg
aaaggaggttgctcgtgcatgtcaatgctattgtcagtgcttggaatcgttggtcttgct
cttgtcatttggctgctggttaagtacctctaa
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