Raphanus sativus (radish): 108823448
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Entry
108823448 CDS
T06014
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108823448
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
108823448
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108823448
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
CDC45
Motif
Other DBs
NCBI-GeneID:
108823448
NCBI-ProteinID:
XP_018452163
UniProt:
A0A6J0KX44
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Position
2:34354230..34358095
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AA seq
620 aa
AA seq
DB search
MPALTRNKKKGAKLQTETPPLNRRTKSNTAPAKSHKPPLKKQRKGISYEKPEVVSNDDEE
EEEEVSEQSDEELGSDFSSEEEEDTEPLADDFLGGSDDEEEEGTLGSSDSDSDGSDLEKE
SKAIDGEREREERDAKDELQMNIKEQPDEFRLPTKKELEEEASGPPDLPALQTRIKEIVR
ILSNFKDLRPEGVKRKEFVEQLKADLASYYGYNEFLIGTLVEMFPPVELMELIEAFEKKR
PTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYLAGFYML
QSASSFLPVMALAPRENERVVDMAAAPGGKTTYVASLMKNTGIIYANEMKVPRLKSLTAN
LHRMGVTNTVVCNYDGRELPKVFGQNSVDRVLLDAPCSGTGVISKDESVKTSKSANDIKK
FADLQKQLILAAIDLVDAESKTGGYIVYSTCSIMIPENEAVIDYALKKRDVKLVPCGLDF
GQAGFTRFREHRFHPTLEKTRRFYPHVHNMDGFFVAKLKKMSNETKASEGDEPVETKEQA
QLSSDDDDDDEPKQDTKVDKNKGRIPISKPNNKGNKNKNTNVEGPRKQKKKRSQWKAEIA
QAREDKRKVMRKNTKEPGRK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctctaacgcgtaacaagaagaagggagctaagctgcagactgagactcctcca
ctgaataggcggacgaagtcgaatactgcgccggcgaaatctcataagcctccgttgaag
aaacagaggaaaggtatttcgtatgagaagcctgaagtagtttctaatgatgatgaggag
gaggaagaagaagtgagtgaacagtctgatgaagaattgggttctgacttttcctcagag
gaggaggaggatacagagccattggccgacgactttctgggtggtagcgatgatgaagag
gaggagggaactttgggttcttctgattctgactctgatgggtctgatctcgagaaggag
agtaaagctattgatggagaacgtgaaagggaggaacgagatgcaaaagatgaactccag
atgaacattaaggagcaacctgatgagtttcgtctaccaaccaaaaaggaacttgaagaa
gaggcaagtgggccaccagatcttcctgccttgcaaacgaggattaaagagattgttaga
atcctgtcgaattttaaggatttgaggccagaaggagtcaagaggaaggagtttgttgag
cagcttaaggctgatcttgcttcttattacggctataatgagtttctcattggaactctc
gttgagatgtttcctcccgttgaactcatggaactaatcgaagcttttgaaaagaaaagg
cctacgtctatacgaaccaacactcttaagactcggagacgggatctggctgatgtactt
ttgaacagaggagttaatctagatcccttaagcaagtggtcaaaagttggacttgtcgtt
tatgattcacaagttccaattggtgcaactcctgaatatttggctggtttctatatgttg
caaagtgctagttccttcttgccggtgatggctcttgctcctcgagagaatgagcgggtt
gtggacatggctgctgcccctggtggtaaaacaacttatgttgcttccctaatgaaaaac
actggcataatatatgcaaacgagatgaaagtacctaggcttaagtcacttactgccaat
ctgcatcgcatgggggtgacaaataccgtagtttgtaactatgatggaagagagctaccc
aaggtttttggtcagaactcggtagatagagtattgttggatgctccttgcagtggaact
ggagttatatcaaaagatgaatcagttaaaacttccaaaagtgctaatgacataaagaaa
tttgccgatttgcaaaagcaacttatacttgctgcgattgatttggtggacgccgaatcc
aaaaccggtggatatattgtttactcaacatgctccattatgattcctgagaacgaagct
gtaatcgactatgccttaaaaaagagggatgtcaaacttgttccatgtggacttgatttt
gggcaagcaggatttaccagatttagagaacaccggttccaccctactttggagaaaact
agacgtttctatccccacgtacacaacatggacggattctttgtggcgaagctgaagaag
atgagcaatgaaaccaaggcttcagaaggtgatgagccggttgaaacaaaagagcaagct
cagttgtctagtgatgacgatgacgatgacgaaccgaagcaagacactaaagtagacaag
aacaaaggaagaattccaatctcaaagccgaacaacaaaggcaacaagaacaaaaatacc
aacgtggaaggacccaggaagcaaaagaagaagagatcacaatggaaggctgaaattgct
caagctagggaagataaaaggaaagtcatgagaaagaatactaaggagcctgggagaaaa
tag
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