Raphanus sativus (radish): 108823574
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Entry
108823574 CDS
T06014
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit D
KO
K07466
replication factor A1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03030
DNA replication
rsz03420
Nucleotide excision repair
rsz03430
Mismatch repair
rsz03440
Homologous recombination
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108823574
03420 Nucleotide excision repair
108823574
03430 Mismatch repair
108823574
03440 Homologous recombination
108823574
03460 Fanconi anemia pathway
108823574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108823574
03032 DNA replication proteins [BR:
rsz03032
]
108823574
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108823574
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108823574
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108823574
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108823574
MMR (mismatch excision repair)
108823574
DSBR (double strand breaks repair)
HR (homologous recombination)
108823574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
108823574
NCBI-ProteinID:
XP_018452312
UniProt:
A0A6J0KWM6
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MQNSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGNRYTFSANDGKTRVKAMFTAS
LTPEIVSGKIQNLGLIRLVDFTVNDISSKSTKYFLVTKCESVASALDSEIDLDGKKDEEG
GEAAKRQKLDHSPVRDVKETGIMLKPKKEFVAKSASQIISEQRGNAAPAARMAMTRRVHP
LVSLNPYQGSWTIKVRVTNKGTMRNYRNARGEGCVFNVELTDEEGTQIQATMFNDAARKF
YERFQMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFVPETKFNFVP
IEELGMYVNQRELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESKKTVVVSLWND
LATGVGQELLDMADESPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWYDS
EGKETSMSSIGSGISPSAKNGSWSMYTDRVLLSHITSNPSLGDEKPVFFSTRGYISFIKP
DQTMWYQACKTCNKKVTEAMDSGYWCEGCQKKEEECSLRYIMVVKVSDSTGEAWFSSFND
EAEKIIGCSADELNKLRSEGGEVNEFQTKLKEATWSSHVFRISVTQNEYNGEKRQRVTVK
GVAPVDFAAETRLLLQDISKKNKASQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactctgtaaccccagatgctatctccaccgtattgtcaaacccatctttcgat
tcgtcttcggatcgatctgagatcgtcgtccaagtcgtcgatctcaaaccaatcggcaat
cgctatacgtttagtgccaacgatgggaagacgagagtgaaagctatgttcacagcttcg
ttaacacctgagatcgtttctgggaagattcagaaccttggtctgatccgtctagtggat
ttcactgttaacgacatctcaagcaaatcaacaaagtattttcttgtgacgaaatgtgag
tctgtcgcttctgcgcttgattctgagattgacttggatggtaagaaggatgaggaaggt
ggtgaggccgccaagaggcagaagctagatcactctcctgtgcgtgatgttaaagagact
ggaatcatgttgaaacccaagaaggagtttgttgctaaatcagcttctcagataatctct
gaacagaggggaaatgctgcgccagctgcaagaatggccatgactagaagagttcatcca
cttgtgtccttgaatccttaccaaggaagctggaccatcaaagtccgagtcactaacaag
ggaactatgagaaactacagaaacgctagaggtgaaggatgtgtcttcaatgtcgaacta
actgatgaagaaggaacacaaattcaagctacgatgtttaatgatgctgcaaggaagttc
tatgagaggttccaaatgggaaaggtgtattatatatctaggggatcacttaaacttgct
aacaagcagttcaagacggtccagaatgattacgagatgacacttaatgaaaactcagag
gtggaggaagctagtaacgaggaaatgtttgtacctgagacaaaattcaactttgtaccc
attgaagagttgggtatgtatgtgaatcagagggagcttattgatcttattggtgttgtt
caaagtgtttctcctaccatgagtattagaaggagaactgacaatgagatgatacccaag
agggatataactttggctgatgagtcaaagaaaactgttgtggtgtctctgtggaacgac
ctggcaaccggcgtaggtcaagagcttctggatatggctgatgagtctcctgtaattgca
atcaagtctctcaaagttggagactttcaaggtgtttcgttgtccaccatcagcagaagc
aatgtggtgatcaatcctgaatcaccagaagctaaaaagctgaagtcttggtacgactct
gaaggcaaggagacatccatgtcttccattggctcagggattagcccatctgctaagaat
ggatcttggtctatgtacacagacagagtccttctctctcacatcacaagcaacccatct
ctaggcgatgaaaagcctgtgttttttagcactaggggttacataagcttcatcaaacca
gaccagacaatgtggtaccaagcttgtaagacttgtaacaagaaggtaactgaagcaatg
gactctggttactggtgtgaaggttgccagaagaaagaagaagaatgcagcttaaggtac
ataatggtggtgaaagtctctgactcaacaggagaagcttggttttcatcattcaacgat
gaagcagagaagattattggatgttcggctgatgagctcaacaaactaagatctgaggga
ggtgaagtaaatgagtttcagacaaagctgaaagaagcaacctggtcgtcgcatgtcttc
aggattagcgtcactcagaatgagtacaacggggagaagaggcagagggtgactgtgaaa
ggagtggctcctgttgattttgctgctgaaacaagattgttactccaagacatctccaag
aagaacaaagcatctcagtag
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