Raphanus sativus (radish): 108823603
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Entry
108823603 CDS
T06014
Name
(RefSeq) homeobox-leucine zipper protein PROTODERMAL FACTOR 2
KO
K09338
homeobox-leucine zipper protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108823603
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
108823603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
108823603
NCBI-ProteinID:
XP_018452347
UniProt:
A0A6J0KXM0
LinkDB
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Position
9:complement(21622194..21628804)
Genome browser
AA seq
745 aa
AA seq
DB search
MYHPSMFESHHMFDMTTKSTSDNDLGITGSREDEFETKSGTEVTTENPSGEELQDPNQRP
NKKKRYHRHTQRQIQELEAFFKECPHPDDKQRKELSRDLCLEPLQVKFWFQNKRTQMKAQ
HERHENQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLRE
EIDRISAIAAKYVGKPVGSSFAPLAIHGPSRSLELEVGNFGNQTGFVGDMYGTGDILRSV
SIPSDTDKPMIVELAVAAMEELVRMAQSGDPLWVSTGNSMELLNEEEYFRTFPRGIGPKQ
LGLRTEASRESAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGAL
QVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPNLISRTRRRPSGCLI
QELPNGYSKVTWIEHMEVDDRSVHTMYKPLVHSGLAFGAKRWVSTLERQCERLASSMASN
IPASDLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSSTGSDDVRVMTRKSM
DDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGMVQEMAHIANGREP
GNCVSLLRVNSGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYVALLP
SGFAILPDGSGGGGGGDGNDQEVVSSSNASGSCGSLLTVAFQILVDSVPTAKLSLGSVAT
VNSLIKCTVERIKAALACDVGGGAP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatccaagcatgtttgagagtcaccacatgttcgacatgaccacaaagagtacc
tccgataacgacttgggaatcaccggaagccgagaagatgagtttgagaccaagtcaggc
accgaggtcaccaccgagaatccttctggtgaagagcttcaagatcctaaccaacgtccc
aacaaaaagaagcgttaccatcgccacacgcagcgccaaattcaagagctcgaagcgttc
tttaaagaatgtcctcatccggatgataagcaacgtaaagagctgagccgtgatctctgc
ctagagcctctccaagtaaagttttggttccaaaacaaacgcacacaaatgaaggcacaa
catgagaggcatgagaaccagattcttaagtcagacaatgacaagctcagagcagagaac
aatagatacaaagaggctctaagcaatgctacatgccctaactgtggcggtccagctgct
atcggagaaatgtccttcgatgaacagcatctcaggatcgaaaatgctcgcctccgcgaa
gagattgataggatctctgccattgctgcaaaatacgttggaaagccagtaggatcttca
ttcgctccactagccatccacgggccttctcgttctctggaacttgaagttgggaacttc
gggaaccagacaggttttgtaggggacatgtacggaacaggtgacattctgaggtcggtt
tcaattccttctgatacagacaagcctatgatcgtcgagctggcggttgcagctatggag
gaactcgtgagaatggctcaatctggggatccattatgggtttcaaccggtaactcgatg
gagcttctgaacgaagaagagtatttcagaacgtttccaagaggaatcggaccaaagcaa
ttagggttgagaacagaagcgtcaagagaatcagcggtggttataatgaatcacatcaat
ctcgttgagattctcatggatgtgaatcaatggtcttgtgtgttctctgggatcgtatca
agagccttgacgcttgaagttctgtcgaccggagttgctgggaactacaatggtgcattg
caagtgatgacagctgagtttcaagttccgtcgccgctagttccgacacgtgagaactac
tttgtgagatactgtaaacagcatagcgacggttcttgggcagtggttgatgtctcgttg
gacagccttagaccgaatctaatctcgagaacaagaagaaggccttcaggttgtctgatt
caagaattgcctaatggttattccaaggttacttggatagagcatatggaagtggatgat
agatcggttcacacaatgtacaaaccgttggttcattccggtttagctttcggagccaaa
cgttgggtgtctacactcgaacgtcagtgcgagcggctcgcgagttcgatggccagcaac
atcccagcgagtgatctttccgttattacgagtccagaagggaggaagagcatgttgaag
ctggctgagaggatggtgatgagcttctgcagcggtgttggcgcgtcgactgcacacgcg
tggacgacaatgtcgtcgacgggatccgatgatgttcgggtcatgacccggaagagtatg
gatgatccgggaagaccaccgggtattgttcttagcgctgcgacttcgttttggatcccg
gtggctccgaaacgggtttttgatttcctccgtgacgaaaattcaagaagcgagtgggat
attctatccaatggaggaatggttcaagaaatggcgcatatagcaaatggtcgtgagcct
ggaaactgtgtctcattgctccgagtcaatagcgggaactcgagccagagcaacatgctg
atactacaagagagctgcacggacgcgtctggatcgtacgtgatttatgcaccggtggat
atagtggcgatgaacgttgtcttaagcggaggagatcctgattacgtggccttgttgccg
tctggttttgctatattaccggatggttcgggaggtggaggaggaggcgatgggaatgat
caggaagtggtttcttcttctaatgcttcgggaagctgtggttctcttttaacagttgcg
tttcagatacttgttgactctgttcctacagctaaactctctcttggctcggtggctacg
gttaatagtctgatcaaatgtactgtggagaggatcaaagcggcccttgcttgtgacgta
ggtggaggagcaccgtaa
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