Raphanus sativus (radish): 108823830
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Entry
108823830 CDS
T06014
Name
(RefSeq) ubiquitin domain-containing protein DSK2a isoform X1
KO
K04523
ubiquilin
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108823830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108823830
03051 Proteasome [BR:
rsz03051
]
108823830
Membrane trafficking [BR:
rsz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108823830
Proteasome [BR:
rsz03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108823830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
STI1-HOP_DP
Rad60-SLD
UBA_7
Ubiquitin_2
UBA_NBR1_C
CUE
Dsc3_N
UBA_HOIP
RPN13_C
XPC-binding
Motif
Other DBs
NCBI-GeneID:
108823830
NCBI-ProteinID:
XP_018452617
UniProt:
A0A6J0KXH9
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All DBs
Position
2:complement(38013789..38016465)
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AA seq
484 aa
AA seq
DB search
MVGEGGESNEPQTVVVGGEVVDVNVRCSNGSKFSVRTSLESTVESFKALLAQNCDVPANQ
QRLIYKGRILKDDDHTLLSYGVQADHALDMARVSAPSTNARSQTTSPSVVTRGVQQLAQN
PNIVMMNAPSIQNNPELLRTLIRSNPRMRELVDRNPELGHILNDPSFLRQSLQAARNPEL
MREMTRNNDRALSNIEATPEGFNMLRRMYEDVQEPLMNVSMFSGNDGNGVVSNPFAARAR
DTNGETGTGNGVPNTNPLPNPWVAAGGQTTRRGRTNSGWDVGAPVIGGIAGLGGLGMLGG
DPTVGATPDASQTNQFLQNPAMSQMMRSLLSDPQYMNQMMSLNPQLRSLMDSSPRVREMM
QNPEFLRMLSSPDTMQQMMSLQQSLLSGNWSTARQAPGQTGATTGTRNNGGLASLMNMFG
SLGAAGGLSGANQSSVPSEELYATQLQQLEEMGFFDRAENIRALRATNGNVNAAVERLLG
SIGQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggttggggaaggaggagaatcgaacgagccacagaccgtcgtcgtcggaggagaggtg
gttgatgtgaacgtcaggtgctccaacggctcgaaatttagcgtgaggacgagcctcgaa
tcaaccgtagagtctttcaaagctttactagctcagaactgcgacgtcccagctaaccaa
caacgcttgatttacaagggacgcatcctcaaagacgacgatcacaccctccttagctat
ggtgtacaggctgatcacgctcttgatatggctcgagtctctgcaccttctacaaatgct
aggagccaaactacttcacctagtgttgttactcgaggggttcaacaactagctcaaaac
cctaacattgttatgatgaacgcaccgagcattcagaacaaccctgaacttctgaggacg
ttgataaggagcaaccctcggatgcgtgagcttgtggatcgtaaccctgagcttggacat
atactcaacgacccgagcttccttcggcagagtctgcaagctgcgaggaaccctgagctt
atgcgtgagatgacgcggaataacgatagggcgttgagtaacattgaggctactcctgag
gggtttaacatgcttaggcgtatgtatgaagatgtccaggaaccgttgatgaacgtttcg
atgttttcagggaacgatggaaacggtgtcgtttctaatccgtttgctgcacgagctaga
gataccaatggtgaaacagggacagggaatggtgtgccaaatacaaatccacttccaaat
ccttgggttgctgcaggtggccagacaactaggcgtggaaggacgaattcaggttgggat
gttggagcccctgtcattggtggcattgctggtcttggtggactaggcatgctaggtggg
gatccaacggttggtgctactccagatgcctcgcaaacgaaccagtttttgcaaaatcca
gccatgtcacagatgatgcgaagcttactttccgatccacaatacatgaatcagatgatg
agtctcaacccacaacttcgaagcttgatggattcaagtcctcgggtgagggaaatgatg
cagaatccagagttccttcgtatgcttagctctccagacacaatgcagcaaatgatgagt
cttcagcaatcacttttatctggaaactggagtacggccagacaggctccagggcaaaca
ggtgccaccacaggcacaaggaataacgggggactcgcttcattgatgaatatgtttggc
agtcttggtgctgctggtggcttaagtggtgcgaaccagtctagtgtaccttctgaggag
ctatacgccacacaattgcaacagctagaggaaatgggtttctttgacagagcagagaac
attagggcgttgcgtgcaaccaacggcaacgttaacgctgctgtagaaagactcttgggg
agtatcggccagtga
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